RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 SLC11A1P49279 550 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 SMAD4Q13485 552 aaKnown RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 SMC1AQ14683 1233 aaKnown RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 ZRSR1Q15695 479 aaKnown RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 MAPK6Q16659 721 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 FAM187BQ17R55 369 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 TMEM132AQ24JP5 1023 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 ARL6IP4Q66PJ3 421 aaKnown RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 BRAPQ7Z569 592 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 TMEM173Q86WV6 379 aaPredicted RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 MSLNLQ96KJ4 702 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 GAD1Q99259 594 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 MMTAG2Q9BU76 263 aaKnown RBP24.4■■□□□ 1.5
C2CD3-216ENST00000541922 POLD4Q9HCU8 107 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 CLEC1BQ9P126 229 aa24.4■■□□□ 1.5
C2CD3-216ENST00000541922 TDRD15B5MCY1 1934 aaKnown RBP24.39■■□□□ 1.5
C2CD3-216ENST00000541922 VPS37CA5D8V6 355 aaPredicted RBP24.39■■□□□ 1.49
C2CD3-216ENST00000541922 DDHD2O94830 711 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 PDCP20941 246 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 MLH1P40692 756 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 DDX53Q86TM3 631 aaKnown RBP24.39■■□□□ 1.49
C2CD3-216ENST00000541922 VPS52Q8N1B4 723 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 TMEM175Q9BSA9 504 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 NXF3Q9H4D5 531 aaKnown RBP24.39■■□□□ 1.49
C2CD3-216ENST00000541922 BARX2Q9UMQ3 279 aaPredicted RBP24.39■■□□□ 1.49
C2CD3-216ENST00000541922 GIT1Q9Y2X7 761 aa24.39■■□□□ 1.49
C2CD3-216ENST00000541922 ARL5CA6NH57 179 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 B4GALT3O60512 393 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 ALDH2P05091 517 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 PRKCBP05771 671 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 SRGAP2BP0DMP2 458 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 LIG1P18858 919 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 SSTR3P32745 418 aaPredicted RBP24.38■■□□□ 1.49
C2CD3-216ENST00000541922 CA8P35219 290 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 PRPF4BQ13523 1007 aaKnown RBP24.38■■□□□ 1.49
C2CD3-216ENST00000541922 SMAD2Q15796 467 aaKnown RBP24.38■■□□□ 1.49
C2CD3-216ENST00000541922 GJD3Q8N144 294 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 MRPL43Q8N983 215 aaKnown RBP24.38■■□□□ 1.49
C2CD3-216ENST00000541922 PRKAG3Q9UGI9 489 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 FAN1Q9Y2M0 1017 aa24.38■■□□□ 1.49
C2CD3-216ENST00000541922 N4BP3O15049 544 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 INPPL1O15357 1258 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 CXCL14O95715 111 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 EFNA5P52803 228 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 RBM10P98175 930 aaKnown RBP24.37■■□□□ 1.49
C2CD3-216ENST00000541922 COASYQ13057 564 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 VN1R2Q8NFZ6 395 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 BCL7CQ8WUZ0 217 aaPredicted RBP24.37■■□□□ 1.49
C2CD3-216ENST00000541922 CDK5RAP3Q96JB5 506 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 CCDC113Q9H0I3 377 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 NT5C3AQ9H0P0 336 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 CD320Q9NPF0 282 aa24.37■■□□□ 1.49
C2CD3-216ENST00000541922 C2orf71A6NGG8 1288 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 ACKR2O00590 384 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 BMP15O95972 392 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 AKAP5P24588 427 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 SCNN1GP51170 649 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 HYIQ5T013 277 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 KCNK18Q7Z418 384 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 KCTD17Q8N5Z5 321 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 SMRP1Q8NCR6 262 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 ZFP42Q96MM3 310 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 KIFC3Q9BVG8 833 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 ZBP1Q9H171 429 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 PARP2Q9UGN5 583 aa24.36■■□□□ 1.49
C2CD3-216ENST00000541922 TTLL13PA6NNM8 815 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 NRP1O14786 923 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 HIP1RO75146 1068 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 CTSAP10619 480 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 RINT1Q6NUQ1 792 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 LLGL2Q6P1M3 1020 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 TMEM184AQ6ZMB5 413 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 ADHFE1Q8IWW8 467 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 TMEM87AQ8NBN3 555 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 AK8Q96MA6 479 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 DRC1Q96MC2 740 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 PNMA5Q96PV4 448 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 PLIN2Q99541 437 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 ADPGKQ9BRR6 497 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 RUSC1Q9BVN2 902 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 PDZD7Q9H5P4 517 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 MIOSQ9NXC5 875 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 STK39Q9UEW8 545 aa24.35■■□□□ 1.49
C2CD3-216ENST00000541922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.34■■□□□ 1.49
C2CD3-216ENST00000541922 CCDC169A6NNP5 214 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 SSBP05455 408 aaKnown RBP eCLIP24.34■■□□□ 1.49
C2CD3-216ENST00000541922 PEX3P56589 373 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 ZP2Q05996 745 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 KCNC3Q14003 757 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 GIT2Q14161 759 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 C1orf186Q6ZWK4 172 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 COLGALT2Q8IYK4 626 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 INTS4Q96HW7 963 aaKnown RBP24.34■■□□□ 1.49
C2CD3-216ENST00000541922 KLK14Q9P0G3 267 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 USP20Q9Y2K6 914 aa24.34■■□□□ 1.49
C2CD3-216ENST00000541922 PRG3Q9Y2Y8 225 aaPredicted RBP24.34■■□□□ 1.49
C2CD3-216ENST00000541922 ZMYM2Q9UBW7 1377 aa24.33■■□□□ 1.49
C2CD3-216ENST00000541922 MYH11P35749 1972 aa24.33■■□□□ 1.49
C2CD3-216ENST00000541922 K7ERI5 159 aa24.33■■□□□ 1.49
C2CD3-216ENST00000541922 NR1I2O75469 434 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms