RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MAP9Q49MG5 647 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 GPR158Q5T848 1215 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 PGM2L1Q6PCE3 622 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 UNQ6494/PRO21346Q6UXR6 183 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 TCEAL8Q8IYN2 117 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 PLA2G15Q8NCC3 412 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 TMEM176AQ96HP8 235 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-217ENST00000541578 RPL10LQ96L21 214 aaKnown RBP5.37□□□□□ -1.55
SNHG1-217ENST00000541578 CAMKK2Q96RR4 588 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 HAPLN2Q9GZV7 340 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 EMC7Q9NPA0 242 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 SPTLC3Q9NUV7 552 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 MKS1Q9NXB0 559 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 USP36Q9P275 1121 aaKnown RBP5.37□□□□□ -1.55
SNHG1-217ENST00000541578 DNAI1Q9UI46 699 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 RCAN3Q9UKA8 241 aa5.37□□□□□ -1.55
SNHG1-217ENST00000541578 OPHN1O60890 802 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 AMHP03971 560 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 NBPF7P0C2Y1 421 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-217ENST00000541578 LSP1P33241 339 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 ACAP1Q15027 740 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 CLUL1Q15846 466 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 NXNQ6DKJ4 435 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 CXorf57Q6NSI4 855 aaKnown RBP5.36□□□□□ -1.55
SNHG1-217ENST00000541578 ESPNLQ6ZVH7 1005 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 SMC5Q8IY18 1101 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 D2HGDHQ8N465 521 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 ZNF808Q8N4W9 903 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-217ENST00000541578 ANKRD53Q8N9V6 530 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 ZNF610Q8N9Z0 462 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 TTC8Q8TAM2 541 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 SLC5A5Q92911 643 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 NOL10Q9BSC4 688 aaKnown RBP5.36□□□□□ -1.55
SNHG1-217ENST00000541578 OSBPL6Q9BZF3 934 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 TRIM8Q9BZR9 551 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 TMPRSS5Q9H3S3 457 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 MSRAQ9UJ68 235 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 FANCD2Q9BXW9 1451 aa5.36□□□□□ -1.55
SNHG1-217ENST00000541578 TNKSO95271 1327 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 MYPNQ86TC9 1320 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 ELL2O00472 640 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 XPOTO43592 962 aaKnown RBP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 RFPL1O75677 317 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 PCDH8O95206 1070 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 HNRNPLP14866 589 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 VCAM1P19320 739 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 PHC1P78364 1004 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 NRN1LQ496H8 165 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 MINDY4Q4G0A6 757 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 KRT40Q6A162 431 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 MAGEB6Q8N7X4 407 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 FERMT2Q96AC1 680 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 FUBP3Q96I24 572 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 GPHA2Q96T91 129 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 MPHOSPH9Q99550 1183 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 ZNF747Q9BV97 191 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 VPS11Q9H270 941 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 PRDM11Q9NQV5 511 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 GIT1Q9Y2X7 761 aa5.35□□□□□ -1.55
SNHG1-217ENST00000541578 NOC2LQ9Y3T9 749 aaKnown RBP5.35□□□□□ -1.55
SNHG1-217ENST00000541578 ST20-MTHFSA0A0A6YYL1 179 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 TOX4O94842 621 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 FSBPO95073 299 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 IL33O95760 270 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 VSIG10L2P0DP72 767 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 PF4V1P10720 104 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 TACR2P21452 398 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 HIBADHP31937 336 aaKnown RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 IARSP41252 1262 aaKnown RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 RECQLP46063 649 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 ACAP2Q15057 778 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 TERF2Q15554 542 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 USP39Q53GS9 565 aaKnown RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 RNF207Q6ZRF8 634 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 FRMD7Q6ZUT3 714 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 GAREM2Q75VX8 874 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 EXTL1Q92935 676 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 CLIP3Q96DZ5 547 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-217ENST00000541578 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 C14orf119Q9NWQ9 140 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 KCNG1Q9UIX4 513 aa5.34□□□□□ -1.55
SNHG1-217ENST00000541578 ABCC8Q09428 1581 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 A0A0A6YYK5 440 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-217ENST00000541578 UBE2QL1A1L167 161 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 GOLGA8AA7E2F4 631 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 CAPN14A8MX76 684 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 VSTM5A8MXK1 200 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 PLSCR1O15162 318 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 IFIT2P09913 472 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms