RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TTLL13PA6NNM8 815 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GALTP07902 379 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ITGA4P13612 1032 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NAMPTP43490 491 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 KRT17Q04695 432 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PLPP4Q5VZY2 271 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PDE12Q6L8Q7 609 aaKnown RBP19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ZBTB8OSQ8IWT0 167 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 EFHBQ8N7U6 833 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PNMA5Q96PV4 448 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TCF25Q9BQ70 676 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CCDC113Q9H0I3 377 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 C2orf40Q9H1Z8 148 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NXF3Q9H4D5 531 aaKnown RBP19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TLE6Q9H808 572 aa19.74■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PER2O15055 1255 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 DDHD2O94830 711 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GLP2RO95838 553 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 EDN1P05305 212 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PPP2R5AQ15172 486 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 FAM173BQ6P4H8 233 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 SLC27A1Q6PCB7 646 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 URGCPQ8TCY9 931 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 KIFAP3Q92845 792 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 KIFC3Q9BVG8 833 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GBP3Q9H0R5 595 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ZDHHC9Q9Y397 364 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ATP6V1DQ9Y5K8 247 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TCHHQ07283 1943 aa19.73■□□□□ 0.75
TNFRSF1A-209ENST00000536717 HIDE1A8MVS5 230 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 INPPL1O15357 1258 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 POMCP01189 267 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 SLC11A1P49279 550 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ZRSR1Q15695 479 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 DUSP6Q16828 381 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PUS10Q3MIT2 529 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 RINT1Q6NUQ1 792 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 DAW1Q8N136 415 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 BCL7CQ8WUZ0 217 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TMEM169Q96HH4 297 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 IGSF21Q96ID5 467 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 MSLNLQ96KJ4 702 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ZNF396Q96N95 335 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GAD1Q99259 594 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 RUSC1Q9BVN2 902 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TRIM6Q9C030 488 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NGRNQ9NPE2 291 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 UBN1Q9NPG3 1134 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ENTPD7Q9NQZ7 604 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CLEC1BQ9P126 229 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 KANSL3Q9P2N6 904 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CITO14578 2027 aa19.72■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ARL5CA6NH57 179 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NPTXRO95502 500 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PRKCBP05771 671 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 MLH1P40692 756 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NDUFV1P49821 464 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 RBM10P98175 930 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CLUL1Q15846 466 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 MAPK6Q16659 721 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 C1orf186Q6ZWK4 172 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 TMC7Q7Z402 723 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 DEPTORQ8TB45 409 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 IFT74Q96LB3 600 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ZFP42Q96MM3 310 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 APOL6Q9BWW8 343 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 MIOSQ9NXC5 875 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 USP20Q9Y2K6 914 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CARNS1A5YM72 827 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 BMP15O95972 392 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GRIN1Q05586 938 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 MAPK7Q13164 816 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 FAM178BQ8IXR5 827 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GSTCDQ8NEC7 633 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 VN1R2Q8NFZ6 395 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PLIN2Q99541 437 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 NT5C3AQ9H0P0 336 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 PDZD7Q9H5P4 517 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CD320Q9NPF0 282 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 BARX2Q9UMQ3 279 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 GIT1Q9Y2X7 761 aa19.71■□□□□ 0.75
TNFRSF1A-209ENST00000536717 ACKR2O00590 384 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 MBTPS2O43462 519 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 HIP1RO75146 1068 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 AKAP5P24588 427 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SCNN1GP51170 649 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PRPF4BQ13523 1007 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KCNC3Q14003 757 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FOXD4L6Q3SYB3 417 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TMEM119Q4V9L6 283 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FOXD4L3Q6VB84 417 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KCTD17Q8N5Z5 321 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 AK8Q96MA6 479 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FAM193BQ96PV7 902 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CDCA3Q99618 268 aaPredicted RBP19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TMEM175Q9BSA9 504 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 VN1R3Q9BXE9 311 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms