RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 DOK3Q7L591 496 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 HOMER1Q86YM7 354 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 ZNF610Q8N9Z0 462 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 SLC46A2Q9BY10 475 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 HDAC5Q9UQL6 1122 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 PPP2R3BQ9Y5P8 575 aa6.72□□□□□ -1.33
VBP1-203ENST00000535916 NRP2O60462 931 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 NUDT3O95989 172 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
VBP1-203ENST00000535916 GPR15P49685 360 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 PPARAQ07869 468 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 SEPT7Q16181 437 aaKnown RBP6.71□□□□□ -1.34
VBP1-203ENST00000535916 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
VBP1-203ENST00000535916 BEND2Q8NDZ0 799 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 NINJ1Q92982 152 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 TRPM5Q9NZQ8 1165 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 TMPRSS11EQ9UL52 423 aa6.71□□□□□ -1.34
VBP1-203ENST00000535916 LEFTY2O00292 366 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 B3GALT2O43825 422 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 TERF2Q15554 542 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 HECTD2Q5U5R9 776 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 GPRIN1Q7Z2K8 1008 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
VBP1-203ENST00000535916 COL4A3Q01955 1670 aa6.7□□□□□ -1.34
VBP1-203ENST00000535916 PRR5-ARHGAP8B1AHC4 643 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 LSP1P33241 339 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 MANFP55145 182 aaKnown RBP6.69□□□□□ -1.34
VBP1-203ENST00000535916 NRG3P56975 720 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 UBE3CQ15386 1083 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 CSRP2Q16527 193 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 IQSEC1Q6DN90 963 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 GDF7Q7Z4P5 450 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 LYSMD2Q8IV50 215 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 NIM1KQ8IY84 436 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 TARS2Q9BW92 718 aaKnown RBP6.69□□□□□ -1.34
VBP1-203ENST00000535916 ANO3Q9BYT9 981 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 PRDM12Q9H4Q4 367 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
VBP1-203ENST00000535916 FANCLQ9NW38 375 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 ANKFY1Q9P2R3 1169 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 EVLQ9UI08 416 aaPredicted RBP6.69□□□□□ -1.34
VBP1-203ENST00000535916 CHST2Q9Y4C5 530 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
VBP1-203ENST00000535916 NCR1O76036 304 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 CLEC2LP0C7M8 214 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 LSSP48449 732 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 SCNN1BP51168 640 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 TRIM25Q14258 630 aaKnown RBP6.68□□□□□ -1.34
VBP1-203ENST00000535916 SART3Q15020 963 aaKnown RBP6.68□□□□□ -1.34
VBP1-203ENST00000535916 SYT12Q8IV01 421 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 GLB1L2Q8IW92 636 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 TOR3AQ9H497 397 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 SPON1Q9HCB6 807 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 AKIP1Q9NQ31 210 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 ZNHIT2Q9UHR6 403 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 PRSS50Q9UI38 385 aa6.68□□□□□ -1.34
VBP1-203ENST00000535916 TMEM200CA6NKL6 621 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 PRAMEF4O60810 478 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 LTA4HP09960 611 aaKnown RBP6.67□□□□□ -1.34
VBP1-203ENST00000535916 HSP90B1P14625 803 aaKnown RBP6.67□□□□□ -1.34
VBP1-203ENST00000535916 ZEB1P37275 1124 aaPredicted RBP6.67□□□□□ -1.34
VBP1-203ENST00000535916 ADCYAP1R1P41586 468 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 RNASE9P60153 205 aaKnown RBP6.67□□□□□ -1.34
VBP1-203ENST00000535916 IL2P60568 153 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 OCRLQ01968 901 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 Q6YL49 198 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 SLC41A1Q8IVJ1 513 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 PPM1KQ8N3J5 372 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 APPBP2Q92624 585 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 DCLRE1CQ96SD1 692 aaKnown RBP6.67□□□□□ -1.34
VBP1-203ENST00000535916 TEX101Q9BY14 249 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 SERHL2Q9H4I8 314 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 ZMYM3Q14202 1370 aa6.67□□□□□ -1.34
VBP1-203ENST00000535916 RNASET2O00584 256 aaKnown RBP6.66□□□□□ -1.34
VBP1-203ENST00000535916 KDM1AO60341 852 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 NDUFA10O95299 355 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 FKBP9O95302 570 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
VBP1-203ENST00000535916 APBA1Q02410 837 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 NHLH2Q02577 135 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 ANKS6Q68DC2 871 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 CCDC62Q6P9F0 684 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 BTNL9Q6UXG8 535 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 FRMD7Q6ZUT3 714 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 FKBP9P1Q75LS8 142 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 OR2W6PQ8NHA6 318 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 UBXN4Q92575 508 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 VOPP1Q96AW1 172 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 CDC5LQ99459 802 aaKnown RBP6.66□□□□□ -1.34
VBP1-203ENST00000535916 RIOX1Q9H6W3 641 aa6.66□□□□□ -1.34
VBP1-203ENST00000535916 TMEM127O75204 238 aa6.65□□□□□ -1.34
VBP1-203ENST00000535916 BROXQ5VW32 411 aa6.65□□□□□ -1.34
VBP1-203ENST00000535916 ABHD15Q6UXT9 468 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms