RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 EP400NLQ6ZTU2 488 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 MAEAQ7L5Y9 396 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 MCPH1Q8NEM0 835 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
CHD4-204ENST00000535810 PPP2R3CQ969Q6 453 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 ZNF558Q96NG5 402 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 TLR9Q9NR96 1032 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 LZTS1Q9Y250 596 aa9.81□□□□□ -0.84
CHD4-204ENST00000535810 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.81□□□□□ -0.84
CHD4-204ENST00000535810 ARHGEF35A5YM69 484 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 PP2D1A8MPX8 630 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 FSCN2O14926 492 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 LINC01565O15544 149 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 B4GALT5O43286 388 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 MAP3K7O43318 606 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 TBX10O75333 385 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 OFD1O75665 1012 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 ARF4P18085 180 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 CYP11B2P19099 503 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 AXLP30530 894 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 ERVFC1P60507 584 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 FOXK2Q01167 660 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 DLX2Q07687 328 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 CUL4AQ13619 759 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 PDIA5Q14554 519 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 NOMO2Q5JPE7 1267 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 LARP1BQ659C4 914 aaKnown RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 CDCA2Q69YH5 1023 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 NOTUMQ6P988 496 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 MRPL10Q7Z7H8 261 aaKnown RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 TMEM173Q86WV6 379 aaPredicted RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 SLC39A11Q8N1S5 342 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 SMG8Q8ND04 991 aaKnown RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 BSNDQ8WZ55 320 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 PGBD4Q96DM1 585 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 CPB2Q96IY4 423 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 EIF2AQ9BY44 585 aaKnown RBP9.8□□□□□ -0.84
CHD4-204ENST00000535810 RAB34Q9BZG1 259 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 BHMT2Q9H2M3 363 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 RSAD1Q9HA92 442 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 TBC1D13Q9NVG8 400 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 SPG21Q9NZD8 308 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 INPP5FQ9Y2H2 1132 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
CHD4-204ENST00000535810 CFAP54Q96N23 3096 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 LRRIQ4A6NIV6 560 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 B4GALT3O60512 393 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 ZC3H11AO75152 810 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHD4-204ENST00000535810 GLP2RO95838 553 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 ALADP13716 330 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 IL9P15248 144 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 FECHP22830 423 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 CDC25AP30304 524 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 NRIP1P48552 1158 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 ALDH7A1P49419 539 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 AFF1P51825 1210 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 BCAR1P56945 870 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 ADAM15Q13444 863 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 PUS10Q3MIT2 529 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 KRT79Q5XKE5 535 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 RBM23Q86U06 439 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 FBXL18Q96ME1 805 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 EPAS1Q99814 870 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 TCF25Q9BQ70 676 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 MMTAG2Q9BU76 263 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 CSRNP2Q9H175 543 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 CD320Q9NPF0 282 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 DDX19AQ9NUU7 478 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 PUF60Q9UHX1 559 aaKnown RBP9.79□□□□□ -0.84
CHD4-204ENST00000535810 IPPQ9Y573 584 aa9.79□□□□□ -0.84
CHD4-204ENST00000535810 A0A1B0GUA9 196 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 HIDE1A8MVS5 230 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 NT5C1B-RDH14C9J2C7 533 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 PER2O15055 1255 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 INPPL1O15357 1258 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 MLH1P40692 756 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 NAMPTP43490 491 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 NDUFV1P49821 464 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 KRT17Q04695 432 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 NCBP1Q09161 790 aaKnown RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 CLUL1Q15846 466 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 DUSP6Q16828 381 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
CHD4-204ENST00000535810 PLPP4Q5VZY2 271 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 KCNK18Q7Z418 384 aa9.78□□□□□ -0.84
CHD4-204ENST00000535810 ZNF280BQ86YH2 543 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms