RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 COPB2P35606 906 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 AP3B2Q13367 1082 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 TAF1BQ53T94 588 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 ADCK2Q7Z695 626 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 NUP93Q8N1F7 819 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 XXYLT1Q8NBI6 393 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 V9GYQ6 96 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 IQANK1A0A1B0GTG1 560 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 COPEO14579 308 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 SURF1Q15526 300 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 LRRC23Q53EV4 343 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 ZNF564Q8TBZ8 553 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 PITPNM3Q9BZ71 974 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 SPATS2Q86XZ4 545 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 EIF2AK1Q9BQI3 630 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 RGL1Q9NZL6 768 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 CTSHP09668 335 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 TAC1P20366 129 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 PDCLQ13371 301 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 MTM1Q13496 603 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 DRAP1Q14919 205 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 FBXO38Q6PIJ6 1188 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 NSUN6Q8TEA1 469 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 CEP72Q9P209 647 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 ADCY3O60266 1144 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 DDHD2O94830 711 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 PAMP19021 973 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 ACTN3Q08043 901 aaPredicted RBP13.41□□□□□ -0.26
SPG11-203ENST00000535302 BHMTQ93088 406 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 ZNF711Q9Y462 761 aa13.41□□□□□ -0.26
SPG11-203ENST00000535302 CLASP1Q7Z460 1538 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 MAPK13O15264 365 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 ARIH2O95376 493 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 CCDC159P0C7I6 412 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 NLRP11P59045 1033 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 C1orf131Q8NDD1 294 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 TRIM55Q9BYV6 548 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 NMT1P30419 496 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 TSPY1Q01534 308 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 PPM1NQ8N819 430 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 CIITAP33076 1130 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 GRM4Q14833 912 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 ANKMY2Q8IV38 441 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 RNF103-CHMP3A0A140T963 221 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 RASA4BC9J798 803 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 RASA4O43374 803 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 PPP3CCP48454 512 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 MB21D2Q8IYB1 491 aaPredicted RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 ERLEC1Q96DZ1 483 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
SPG11-203ENST00000535302 CPB1P15086 417 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 GPC5P78333 572 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 KRT17Q04695 432 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 FAM81BQ96LP2 452 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 TXLNGQ9NUQ3 528 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 KIF1BO60333 1816 aa13.4□□□□□ -0.26
SPG11-203ENST00000535302 A8MXQ7 604 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 DMC1Q14565 340 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 KNOP1Q1ED39 458 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 EPM2AIP1Q7L775 607 aaPredicted RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 OR6P1Q8NGX9 317 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 CYTH1Q15438 398 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 DHX35Q9H5Z1 703 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 ASNSD1Q9NWL6 643 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 CDC42BPGQ6DT37 1551 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 MMEP08473 750 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 COPS2P61201 443 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPG11-203ENST00000535302 DDX47Q9H0S4 455 aaKnown RBP13.39□□□□□ -0.27
SPG11-203ENST00000535302 SP110Q9HB58 689 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 SENP1Q9P0U3 644 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 H0YC42 278 aa13.39□□□□□ -0.27
SPG11-203ENST00000535302 CSE1LP55060 971 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms