RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MRPL44Q9H9J2 332 aaKnown RBP13.77□□□□□ -0.21
COPB1-208ENST00000532088 IL21Q9HBE4 155 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
COPB1-208ENST00000532088 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 A0A087WZ62 844 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 CHRNA1P02708 482 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 RFC2P35250 354 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 MORC3Q14149 939 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 BMT2Q1RMZ1 405 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 ZNF618Q5T7W0 954 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 PRPF38BQ5VTL8 546 aaKnown RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 EPM2AIP1Q7L775 607 aaPredicted RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 KSR1Q8IVT5 923 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 FDXACB1Q9BRP7 624 aaPredicted RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 CCDC113Q9H0I3 377 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 FZD8Q9H461 694 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 TMEM39AQ9NV64 488 aa13.76□□□□□ -0.21
COPB1-208ENST00000532088 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
COPB1-208ENST00000532088 K7ENM7 598 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SLC16A4O15374 487 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 TIMP1P01033 207 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 PIGRP01833 764 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 IQCF3P0C7M6 154 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SFPQP23246 707 aaKnown RBP eCLIP13.75□□□□□ -0.21
COPB1-208ENST00000532088 AXLP30530 894 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SNRPFP62306 86 aaKnown RBP13.75□□□□□ -0.21
COPB1-208ENST00000532088 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 MAPK6Q16659 721 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 L1TD1Q5T7N2 865 aaKnown RBP13.75□□□□□ -0.21
COPB1-208ENST00000532088 ZNF507Q8TCN5 953 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SCLT1Q96NL6 688 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 TMEM206Q9H813 350 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 SIP14410 1827 aa13.75□□□□□ -0.21
COPB1-208ENST00000532088 DENND3A2RUS2 1198 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 K7ERI5 159 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 ACKR2O00590 384 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 GPR182O15218 404 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 GCNT3O95395 438 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 NMT1P30419 496 aaKnown RBP13.74□□□□□ -0.21
COPB1-208ENST00000532088 STRN3Q13033 797 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 STK4Q13043 487 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 FOXR2Q6PJQ5 311 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 BRICD5Q6PL45 260 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 ZPBP2Q6X784 338 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 MAP4K3Q8IVH8 894 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 GUF1Q8N442 669 aaKnown RBP13.74□□□□□ -0.21
COPB1-208ENST00000532088 KIAA0895Q8NCT3 520 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
COPB1-208ENST00000532088 OSMRQ99650 979 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
COPB1-208ENST00000532088 TBX20Q9UMR3 447 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 EXOC7Q9UPT5 735 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
COPB1-208ENST00000532088 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 LILRB3O75022 631 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 RPS6KA5O75582 802 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 CXCL10P02778 98 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 PFKMP08237 780 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 CTSHP09668 335 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 NLRP12P59046 1061 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
COPB1-208ENST00000532088 TMEM62Q0P6H9 643 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 STIM1Q13586 685 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 MLKLQ8NB16 471 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 TMEM174Q8WUU8 243 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 SCFD1Q8WVM8 642 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 TMEM40Q8WWA1 233 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 APBB2Q92870 758 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 KIFC3Q9BVG8 833 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
COPB1-208ENST00000532088 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 CHST12Q9NRB3 414 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
COPB1-208ENST00000532088 CNTNAP2Q9UHC6 1331 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 ERLIN2O94905 339 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 PRKCBP05771 671 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 MYBP10242 640 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 BMP6P22004 513 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 RGS19P49795 217 aa13.72□□□□□ -0.21
COPB1-208ENST00000532088 CASP5P51878 434 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms