RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 EDAQ92838 391 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 FAM122AQ96E09 287 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 EMILIN2Q9BXX0 1053 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 TRIM6Q9C030 488 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 POLR3FQ9H1D9 316 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 C2orf40Q9H1Z8 148 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 KCNH6Q9H252 994 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 ADAM7Q9H2U9 754 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 PRMT7Q9NVM4 692 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-212ENST00000527887 DNAJB4Q9UDY4 337 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 IPPQ9Y573 584 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 ATG2AQ2TAZ0 1938 aa15.74■□□□□ 0.11
CAPN1-212ENST00000527887 A0A1B0GUA9 196 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 USO1O60763 962 aaKnown RBP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 MED24O75448 989 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 DDHD2O94830 711 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 ARF4P18085 180 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 CYP11B2P19099 503 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 PLA2G5P39877 138 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 RBM10P98175 930 aaKnown RBP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 RABEP1Q15276 862 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 LLGL2Q6P1M3 1020 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 SLC27A1Q6PCB7 646 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 TMEM173Q86WV6 379 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-212ENST00000527887 ZBTB8OSQ8IWT0 167 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 MFSD14AQ96MC6 490 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 GBP3Q9H0R5 595 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 RAPGEFL1Q9UHV5 662 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 MUTYHQ9UIF7 546 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 TRIOO75962 3097 aa15.73■□□□□ 0.11
CAPN1-212ENST00000527887 ARHGEF35A5YM69 484 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 ARL5CA6NH57 179 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 LAD1O00515 517 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 NRP1O14786 923 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 ST18O60284 1047 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 POMCP01189 267 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 CA8P35219 290 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 MTHFRP42898 656 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 PPP2R5AQ15172 486 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 CDCA2Q69YH5 1023 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-212ENST00000527887 BMP8AQ7Z5Y6 402 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 COLGALT2Q8IYK4 626 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 RPGRIP1Q96KN7 1286 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 RIPOR3Q96MK2 946 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 TBC1D32Q96NH3 1257 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 EIF2AQ9BY44 585 aaKnown RBP15.72■□□□□ 0.11
CAPN1-212ENST00000527887 FZD8Q9H461 694 aa15.72■□□□□ 0.11
CAPN1-212ENST00000527887 MRPL17Q9NRX2 175 aaKnown RBP15.72■□□□□ 0.11
CAPN1-212ENST00000527887 LRRIQ4A6NIV6 560 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 C1RP00736 705 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 SOD2P04179 222 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 ANP32AP39687 249 aaKnown RBP15.71■□□□□ 0.11
CAPN1-212ENST00000527887 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.11
CAPN1-212ENST00000527887 DSC1Q08554 894 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 PTPN14Q15678 1187 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 C4orf32Q8N8J7 132 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 SLC22A17Q8WUG5 538 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 BCL7CQ8WUZ0 217 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-212ENST00000527887 CPB2Q96IY4 423 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 GAD1Q99259 594 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 COLEC11Q9BWP8 271 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 DPP7Q9UHL4 492 aa15.71■□□□□ 0.11
CAPN1-212ENST00000527887 LILRB3O75022 631 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 NAMPTP43490 491 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 MCM2P49736 904 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 ZXDAP98168 799 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 MAPK6Q16659 721 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 ATAT1Q5SQI0 421 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 ELMSAN1Q6PJG2 1045 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 POTEGQ6S5H5 508 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 KCTD17Q8N5Z5 321 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 KIFAP3Q92845 792 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 IFT74Q96LB3 600 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
CAPN1-212ENST00000527887 A0A087WWV3 80 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 ACKR2O00590 384 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 N4BP3O15049 544 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 B4GALT3O60512 393 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 URODP06132 367 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 KLRC2P26717 231 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
CAPN1-212ENST00000527887 MLH1P40692 756 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 PRPHP41219 470 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 OR1G1P47890 313 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 EFNA5P52803 228 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 PTGDRQ13258 359 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 KIAA1841Q6NSI8 718 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 TRIM67Q6ZTA4 783 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 CABP7Q86V35 215 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 IGSF22Q8N9C0 903 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms