RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PPATQ06203 517 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 TNIP1Q15025 636 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 CCDC38Q502W7 563 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 WLSQ5T9L3 541 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 TACO1Q9BSH4 297 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 FRMD4BQ9Y2L6 1034 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 GTPBP10A4D1E9 387 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 SLC26A4O43511 780 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 DNAJC8O75937 253 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 FGFR4P22455 802 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 KLRC3Q07444 240 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 MAPK7Q13164 816 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 DHX34Q14147 1143 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 CCDC174Q6PII3 467 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 UBL4BQ8N7F7 174 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 IDI2Q9BXS1 227 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
CAPN1-208ENST00000527323 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
CAPN1-208ENST00000527323 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 F5H6K3 240 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 NUDT17P0C025 328 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 CYP3A7P24462 503 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 UBXN2AP68543 259 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 COG2Q14746 738 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 SLFN13Q68D06 897 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 ETNPPLQ8TBG4 499 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 MGARPQ8TDB4 240 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 EPS8L3Q8TE67 593 aaKnown RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 PGM2Q96G03 612 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 ZNF317Q96PQ6 595 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 GGT7Q9UJ14 662 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 PTPN22Q9Y2R2 807 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 CHMP2AO43633 222 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 MMP13P45452 471 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 SPIRE1Q08AE8 756 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 MESDQ14696 234 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 SPDYCQ5MJ68 293 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 CCDC105Q8IYK2 499 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 EIF2AK1Q9BQI3 630 aaKnown RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 NSRP1Q9H0G5 558 aaKnown RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.25
CAPN1-208ENST00000527323 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 NOD2Q9HC29 1040 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
CAPN1-208ENST00000527323 ANKRD62A6NC57 917 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 MEIS2O14770 477 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 ADCY2Q08462 1091 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 LLGL1Q15334 1064 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CYP2W1Q8TAV3 490 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 COG5Q9UP83 839 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 NCANO14594 1321 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 FZD9O00144 591 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 ASAP2O43150 1006 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 MGRN1O60291 552 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 ATP6V1G2O95670 118 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 EYA4O95677 639 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 FTLP02792 175 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 RINT1Q6NUQ1 792 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 ZDHHC24Q6UX98 284 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 KRT35Q92764 455 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 FOXN3O00409 490 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 PHF2O75151 1096 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 NDUFB10O96000 172 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 AGTP01019 485 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 GAP43P17677 238 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 LRRC14Q15048 493 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CLUL1Q15846 466 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 BMT2Q1RMZ1 405 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CCDC137Q6PK04 289 aaKnown RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
CAPN1-208ENST00000527323 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
CAPN1-208ENST00000527323 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms