RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.54■□□□□ 0.88
CAPN1-203ENST00000525013 PP2D1A8MPX8 630 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 B4GALT3O60512 393 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 DDHD2O94830 711 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 NPTXRO95502 500 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 SRGAP2BP0DMP2 458 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 LIG1P18858 919 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 PRPHP41219 470 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 COASYQ13057 564 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 IL17AQ16552 155 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 TMEM132AQ24JP5 1023 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 SLC27A1Q6PCB7 646 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 MRPL43Q8N983 215 aaKnown RBP20.53■□□□□ 0.88
CAPN1-203ENST00000525013 TMEM87AQ8NBN3 555 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 BSNDQ8WZ55 320 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 GAD1Q99259 594 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 C1QTNF1Q9BXJ1 281 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 C2orf40Q9H1Z8 148 aa20.53■□□□□ 0.88
CAPN1-203ENST00000525013 PRMT7Q9NVM4 692 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-203ENST00000525013 C2orf71A6NGG8 1288 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 ARL5CA6NH57 179 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 EYA4O95677 639 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 ALDH2P05091 517 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 CDC25AP30304 524 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 MLH1P40692 756 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 PPP2R5AQ15172 486 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
CAPN1-203ENST00000525013 CDCA2Q69YH5 1023 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-203ENST00000525013 DDX53Q86TM3 631 aaKnown RBP20.52■□□□□ 0.88
CAPN1-203ENST00000525013 SMRP1Q8NCR6 262 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 DEPTORQ8TB45 409 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 BCL7CQ8WUZ0 217 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-203ENST00000525013 IFT74Q96LB3 600 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 NXF3Q9H4D5 531 aaKnown RBP20.52■□□□□ 0.88
CAPN1-203ENST00000525013 DNM3Q9UQ16 869 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 FAN1Q9Y2M0 1017 aa20.52■□□□□ 0.88
CAPN1-203ENST00000525013 A0A1B0GUA9 196 aa20.51■□□□□ 0.87
CAPN1-203ENST00000525013 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-203ENST00000525013 AUTS2Q8WXX7 1259 aa20.51■□□□□ 0.87
CAPN1-203ENST00000525013 PRIMPOLQ96LW4 560 aa20.51■□□□□ 0.87
CAPN1-203ENST00000525013 ZFP42Q96MM3 310 aa20.51■□□□□ 0.87
CAPN1-203ENST00000525013 POP1Q99575 1024 aaKnown RBP20.51■□□□□ 0.87
CAPN1-203ENST00000525013 E9PMD0 336 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 AKAP5P24588 427 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 NAMPTP43490 491 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 SCNN1GP51170 649 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 ATP2C1P98194 919 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-203ENST00000525013 PRPF4BQ13523 1007 aaKnown RBP20.5■□□□□ 0.87
CAPN1-203ENST00000525013 MAPK6Q16659 721 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 TMEM175Q9BSA9 504 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 APOL5Q9BWW9 433 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 ZBP1Q9H171 429 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 FZD8Q9H461 694 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 PARP2Q9UGN5 583 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 GIT1Q9Y2X7 761 aa20.5■□□□□ 0.87
CAPN1-203ENST00000525013 PRG3Q9Y2Y8 225 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-203ENST00000525013 USP15Q9Y4E8 981 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-203ENST00000525013 MYH11P35749 1972 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 NRP1O14786 923 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 PRKCBP05771 671 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 CTSAP10619 480 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 OR1G1P47890 313 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 FAM187BQ17R55 369 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 ANKRD54Q6NXT1 300 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 TMEM184AQ6ZMB5 413 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 MIOSQ9NXC5 875 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 KLK14Q9P0G3 267 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 USP20Q9Y2K6 914 aa20.49■□□□□ 0.87
CAPN1-203ENST00000525013 C19orf67A6NJJ6 358 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 TTLL13PA6NNM8 815 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 PI4K2BG5E9Z4 385 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 N4BP3O15049 544 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 CLASP2O75122 1294 aaKnown RBP20.48■□□□□ 0.87
CAPN1-203ENST00000525013 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
CAPN1-203ENST00000525013 KCNC3Q14003 757 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 GIT2Q14161 759 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 CASP10Q92851 521 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 MMTAG2Q9BU76 263 aaKnown RBP20.48■□□□□ 0.87
CAPN1-203ENST00000525013 VN1R3Q9BXE9 311 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 HCFC2Q9Y5Z7 792 aa20.48■□□□□ 0.87
CAPN1-203ENST00000525013 CCDC169A6NNP5 214 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 ACKR2O00590 384 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 INPPL1O15357 1258 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 NR1I2O75469 434 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 ALADP13716 330 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 HOXB8P17481 243 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-203ENST00000525013 EFNA5P52803 228 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 COLGALT2Q8IYK4 626 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 CDK5RAP3Q96JB5 506 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 BACH2Q9BYV9 841 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 CCDC113Q9H0I3 377 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 PDZD7Q9H5P4 517 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 STK39Q9UEW8 545 aa20.47■□□□□ 0.87
CAPN1-203ENST00000525013 VPS37CA5D8V6 355 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-203ENST00000525013 DSC1Q08554 894 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms