RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
VEGFA-224ENST00000523873 TARS2Q9BW92 718 aaKnown RBP14.11□□□□□ -0.15
VEGFA-224ENST00000523873 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
VEGFA-224ENST00000523873 TMEM134Q9H6X4 195 aa14.11□□□□□ -0.15
VEGFA-224ENST00000523873 ELAC1Q9H777 363 aaKnown RBP14.11□□□□□ -0.15
VEGFA-224ENST00000523873 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
VEGFA-224ENST00000523873 MTUS1Q9ULD2 1270 aa14.11□□□□□ -0.15
VEGFA-224ENST00000523873 IPPQ9Y573 584 aa14.11□□□□□ -0.15
VEGFA-224ENST00000523873 A0A1B0GUA9 196 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 FRMD3A2A2Y4 597 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 GOLGA6L4A6NEF3 574 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 EPOPA6NHQ4 379 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 RAB27AP51159 221 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 COASYQ13057 564 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 BTG3Q14201 252 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 PCBP1Q15365 356 aaKnown RBP eCLIP14.1□□□□□ -0.154e-7■■□□□ 11.7
VEGFA-224ENST00000523873 HERC4Q5GLZ8 1057 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 ATF7IP2Q5U623 682 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 GLIS3Q8NEA6 775 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 ZBTB45Q96K62 511 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 C7orf25Q9BPX7 421 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 PYM1Q9BRP8 204 aaKnown RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 C17orf80Q9BSJ5 609 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 MRPL4Q9BYD3 311 aaKnown RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 IKZF4Q9H2S9 585 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 NXF3Q9H4D5 531 aaKnown RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 MAGEF1Q9HAY2 307 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
VEGFA-224ENST00000523873 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
VEGFA-224ENST00000523873 RFXAPO00287 272 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 N4BP3O15049 544 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 ZNF202O95125 648 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 MYBP10242 640 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 HARSP12081 509 aaKnown RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 GAP43P17677 238 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 CASP5P51878 434 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 AMPD3Q01432 767 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 STRN3Q13033 797 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 SLC27A1Q6PCB7 646 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 ZBTB33Q86T24 672 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 CCDC65Q8IXS2 484 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 CMTR2Q8IYT2 770 aaKnown RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 CCDC51Q96ER9 411 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 CASD1Q96PB1 797 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 ACO2Q99798 780 aaKnown RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 TRIM6Q9C030 488 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 MRPL44Q9H9J2 332 aaKnown RBP14.09□□□□□ -0.15
VEGFA-224ENST00000523873 TBX20Q9UMR3 447 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 TNFSF13BQ9Y275 285 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 INPP5FQ9Y2H2 1132 aa14.09□□□□□ -0.15
VEGFA-224ENST00000523873 TISP43B9A030 160 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ABLIM1O14639 778 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ZNF623O75123 536 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 GCNT3O95395 438 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 EOMESO95936 686 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 LINC00271P0C7V0 271 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 SKIP12755 728 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ITGA4P13612 1032 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 AKAP5P24588 427 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 AFF1P51825 1210 aaKnown RBP14.08□□□□□ -0.16
VEGFA-224ENST00000523873 KCNA1Q09470 495 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ZNF568Q3ZCX4 644 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 LRRC55Q6ZSA7 311 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 FAM43BQ6ZT52 329 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ZNF720Q7Z2F6 126 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 CEP120Q8N960 986 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 TMEM87AQ8NBN3 555 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 CNNM3Q8NE01 707 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 BICD1Q96G01 975 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 LRRC27Q9C0I9 530 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 TMEM117Q9H0C3 514 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 CDT1Q9H211 546 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 CXCL16Q9H2A7 254 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 PRDM12Q9H4Q4 367 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 SNTG2Q9NY99 539 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 KLK14Q9P0G3 267 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 USP25Q9UHP3 1055 aa14.08□□□□□ -0.16
VEGFA-224ENST00000523873 H0YCG3 227 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-224ENST00000523873 KLRC4O43908 158 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
VEGFA-224ENST00000523873 OFD1O75665 1012 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 PPP1R37O75864 691 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 PRPF6O94906 941 aaKnown RBP14.07□□□□□ -0.16
VEGFA-224ENST00000523873 MLH1P40692 756 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 GTF2BQ00403 316 aa14.07□□□□□ -0.16
VEGFA-224ENST00000523873 SNW1Q13573 536 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms