RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 BCL6BQ8N143 479 aaPredicted RBP4.79□□□□□ -1.64
CAST-242ENST00000515063 AFAP1Q8N556 730 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 TMPRSS5Q9H3S3 457 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 PANK3Q9H999 370 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 THG1LQ9NWX6 298 aaKnown RBP4.79□□□□□ -1.64
CAST-242ENST00000515063 SRRDQ9UH36 339 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 POGZQ7Z3K3 1410 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
CAST-242ENST00000515063 MROH2AA6NES4 1674 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 GOLGA8BA8MQT2 603 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 KIF3BO15066 747 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 PRPF6O94906 941 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 APOL3O95236 402 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 TACR2P21452 398 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 HSD3B2P26439 372 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 MSX2P35548 267 aaPredicted RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 GDF5P43026 501 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 RRP1P56182 461 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 BPIFB4P59827 614 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 RIN1Q13671 783 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 MYBPC3Q14896 1274 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 CREB3L3Q68CJ9 461 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 GIMAP6Q6P9H5 292 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 ESPNLQ6ZVH7 1005 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 SPRED1Q7Z699 444 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 DHX37Q8IY37 1157 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 ANKRD35Q8N283 1001 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 D2HGDHQ8N465 521 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 FERMT2Q96AC1 680 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 TARS2Q9BW92 718 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 VPS11Q9H270 941 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 MTG2Q9H4K7 406 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 C14orf93Q9H972 538 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 KNSTRNQ9Y448 316 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 RBM8AQ9Y5S9 174 aaKnown RBP4.78□□□□□ -1.64
CAST-242ENST00000515063 PIK3C2BO00750 1634 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 ARHGAP31Q2M1Z3 1444 aa4.78□□□□□ -1.64
CAST-242ENST00000515063 ERVK-7P63135 1459 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 A0A0A6YYJ9 748 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 FSBPO95073 299 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 JUNP05412 331 aaKnown RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 LSP1P33241 339 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 LSSP48449 732 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 ADCY7P51828 1080 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 IL2P60568 153 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 PHC1P78364 1004 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 ATP2C1P98194 919 aaPredicted RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 DALRD3Q5D0E6 543 aaKnown RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 KRT40Q6A162 431 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 CYB5RLQ6IPT4 315 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 KANSL1Q7Z3B3 1105 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 SGMS1Q86VZ5 419 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 NXPE1Q8N323 547 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 CHTF18Q8WVB6 975 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 RTF1Q92541 710 aaKnown RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 NKD2Q969F2 451 aaPredicted RBP4.77□□□□□ -1.65
CAST-242ENST00000515063 CCDC136Q96JN2 1154 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 MYL10Q9BUA6 226 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 OSBPL6Q9BZF3 934 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 HAPLN2Q9GZV7 340 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 POFUT1Q9H488 388 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 KCNG1Q9UIX4 513 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 RCAN3Q9UKA8 241 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 ZFYVE9O95405 1425 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 NOS1P29475 1434 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 CD109Q6YHK3 1445 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 GLI2P10070 1586 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 FRMPD1Q5SYB0 1578 aa4.77□□□□□ -1.65
CAST-242ENST00000515063 CAMSAP1Q5T5Y3 1602 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 ZNF891A8MT65 544 aaPredicted RBP4.76□□□□□ -1.65
CAST-242ENST00000515063 TCERG1O14776 1098 aaKnown RBP4.76□□□□□ -1.65
CAST-242ENST00000515063 NRP2O60462 931 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 OPHN1O60890 802 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 FZD7O75084 574 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 RAB11FIP3O75154 756 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 C6P13671 934 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 ACRV1P26436 265 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 PPP2R1AP30153 589 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
CAST-242ENST00000515063 SMAD3P84022 425 aaKnown RBP4.76□□□□□ -1.65
CAST-242ENST00000515063 FOXL1Q12952 345 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 CRIP3Q6Q6R5 217 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 CLEC14AQ86T13 490 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 GPR135Q8IZ08 494 aa4.76□□□□□ -1.65
CAST-242ENST00000515063 THEMISQ8N1K5 641 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms