RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 BARX2Q9UMQ3 279 aaPredicted RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 BDP1A6H8Y1 2624 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 NCOR1O75376 2440 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 A0A1B0GUA9 196 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 VPS37CA5D8V6 355 aaPredicted RBP27.07■■□□□ 1.92
SNF8-213ENST00000514929 HIDE1A8MVS5 230 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 MBTPS2O43462 519 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 DDHD2O94830 711 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 NPTXRO95502 500 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 GLP2RO95838 553 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 LIG1P18858 919 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 SLC11A1P49279 550 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 SMAD4Q13485 552 aaKnown RBP27.07■■□□□ 1.92
SNF8-213ENST00000514929 MAPK6Q16659 721 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 ARL6IP4Q66PJ3 421 aaKnown RBP27.07■■□□□ 1.92
SNF8-213ENST00000514929 BRAPQ7Z569 592 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 MSLNLQ96KJ4 702 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 GAD1Q99259 594 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 MMTAG2Q9BU76 263 aaKnown RBP27.07■■□□□ 1.92
SNF8-213ENST00000514929 FZD8Q9H461 694 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 NXF3Q9H4D5 531 aaKnown RBP27.07■■□□□ 1.92
SNF8-213ENST00000514929 CLEC1BQ9P126 229 aa27.07■■□□□ 1.92
SNF8-213ENST00000514929 ARL5CA6NH57 179 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 B4GALT3O60512 393 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 PDCP20941 246 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 SSTR3P32745 418 aaPredicted RBP27.06■■□□□ 1.92
SNF8-213ENST00000514929 MLH1P40692 756 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 FAM187BQ17R55 369 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 VPS52Q8N1B4 723 aa27.06■■□□□ 1.92
SNF8-213ENST00000514929 ALDH2P05091 517 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 PRKCBP05771 671 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 SRGAP2BP0DMP2 458 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 RBM10P98175 930 aaKnown RBP27.05■■□□□ 1.92
SNF8-213ENST00000514929 PRPF4BQ13523 1007 aaKnown RBP27.05■■□□□ 1.92
SNF8-213ENST00000514929 DDX53Q86TM3 631 aaKnown RBP27.05■■□□□ 1.92
SNF8-213ENST00000514929 GJD3Q8N144 294 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 MRPL43Q8N983 215 aaKnown RBP27.05■■□□□ 1.92
SNF8-213ENST00000514929 TMEM175Q9BSA9 504 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 CD320Q9NPF0 282 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 FAN1Q9Y2M0 1017 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 GIT1Q9Y2X7 761 aa27.05■■□□□ 1.92
SNF8-213ENST00000514929 N4BP3O15049 544 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 CXCL14O95715 111 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 SMAD2Q15796 467 aaKnown RBP27.04■■□□□ 1.92
SNF8-213ENST00000514929 BCL7CQ8WUZ0 217 aaPredicted RBP27.04■■□□□ 1.92
SNF8-213ENST00000514929 CDK5RAP3Q96JB5 506 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 ZFP42Q96MM3 310 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 KIFC3Q9BVG8 833 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 CCDC113Q9H0I3 377 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 PRKAG3Q9UGI9 489 aa27.04■■□□□ 1.92
SNF8-213ENST00000514929 C2orf71A6NGG8 1288 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 ACKR2O00590 384 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 INPPL1O15357 1258 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 AKAP5P24588 427 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 SCNN1GP51170 649 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 EFNA5P52803 228 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 COASYQ13057 564 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 KCNK18Q7Z418 384 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 TMEM87AQ8NBN3 555 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 VN1R2Q8NFZ6 395 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 NT5C3AQ9H0P0 336 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 ZBP1Q9H171 429 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 PARP2Q9UGN5 583 aa27.03■■□□□ 1.92
SNF8-213ENST00000514929 TTLL13PA6NNM8 815 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 NRP1O14786 923 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 BMP15O95972 392 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 HYIQ5T013 277 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 LLGL2Q6P1M3 1020 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 KCTD17Q8N5Z5 321 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 SMRP1Q8NCR6 262 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 DRC1Q96MC2 740 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 PLIN2Q99541 437 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 ADPGKQ9BRR6 497 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 RUSC1Q9BVN2 902 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 PDZD7Q9H5P4 517 aa27.02■■□□□ 1.92
SNF8-213ENST00000514929 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.01■■□□□ 1.91
SNF8-213ENST00000514929 CCDC169A6NNP5 214 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 HIP1RO75146 1068 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 SSBP05455 408 aaKnown RBP eCLIP27.01■■□□□ 1.91
SNF8-213ENST00000514929 CTSAP10619 480 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 OR1G1P47890 313 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 PEX3P56589 373 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 ZP2Q05996 745 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 RINT1Q6NUQ1 792 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 ADHFE1Q8IWW8 467 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 AUTS2Q8WXX7 1259 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 AK8Q96MA6 479 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 PNMA5Q96PV4 448 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 MIOSQ9NXC5 875 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 KLK14Q9P0G3 267 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 STK39Q9UEW8 545 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 USP20Q9Y2K6 914 aa27.01■■□□□ 1.91
SNF8-213ENST00000514929 PRG3Q9Y2Y8 225 aaPredicted RBP27.01■■□□□ 1.91
SNF8-213ENST00000514929 K7ERI5 159 aa27■■□□□ 1.91
SNF8-213ENST00000514929 NR1I2O75469 434 aa27■■□□□ 1.91
SNF8-213ENST00000514929 KCNC3Q14003 757 aa27■■□□□ 1.91
SNF8-213ENST00000514929 GIT2Q14161 759 aa27■■□□□ 1.91
SNF8-213ENST00000514929 TMEM184AQ6ZMB5 413 aa27■■□□□ 1.91
SNF8-213ENST00000514929 C1orf186Q6ZWK4 172 aa27■■□□□ 1.91
SNF8-213ENST00000514929 CABP7Q86V35 215 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms