RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 WDR17Q8IZU2 1322 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 CCDC195A0A1B0GUA6 201 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 H3BRJ5 948 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PIK3R2O00459 728 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 HNRNPRO43390 633 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 SMARCA1P28370 1054 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 HMOX2P30519 316 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PHKA1P46020 1223 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 SERPINB9P50453 376 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 SLC34A1Q06495 639 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 SLC29A2Q14542 456 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 DRAP1Q14919 205 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 TRMT5Q32P41 509 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 ANKRD40Q6AI12 368 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 CDR2LQ86X02 465 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 DGKHQ86XP1 1220 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PLD3Q8IV08 490 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 KLHL23Q8NBE8 558 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 ZNF555Q8NEP9 628 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 AENQ8WTP8 325 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 RBM17Q96I25 401 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 CCSER1Q9C0I3 900 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 MANSC1Q9H8J5 431 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 ADAM22Q9P0K1 906 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 UVRAGQ9P2Y5 699 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PHTF1Q9UMS5 762 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PCDHA1Q9Y5I3 950 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 FRMPD2Q68DX3 1309 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 M0R3G1 203 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 HNRNPDLO14979 420 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 RTN2O75298 545 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 CACNB1Q02641 598 aaPredicted RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 TRADDQ15628 312 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 KNOP1Q1ED39 458 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 LRRC8EQ6NSJ5 796 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 TRIM72Q6ZMU5 477 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 EIF1ADQ8N9N8 165 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 RBM15Q96T37 977 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 PRPF18Q99633 342 aaKnown RBP7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 LY9Q9HBG7 655 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 FIS1Q9Y3D6 152 aa7.75□□□□□ -1.17
UBE2D3-224ENST00000508474 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 SLC16A3O15427 465 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 KCNQ3O43525 872 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 KRT16P08779 473 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 RGS2P41220 211 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 POLGP54098 1239 aaPredicted RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PMS1P54277 932 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 SURF1Q15526 300 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 FIGNQ5HY92 759 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 NLRP9Q7RTR0 991 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 CENPTQ96BT3 561 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 HEMGNQ9BXL5 484 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 AGPAT5Q9NUQ2 364 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 CNOT7Q9UIV1 285 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 JAG2Q9Y219 1238 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 MLH3Q9UHC1 1453 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 MAP3K15Q6ZN16 1313 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ERVV-2B6SEH9 535 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PPIP5K2O43314 1243 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ZBED4O75132 1171 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 KRT7P08729 469 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ZCCHC18P0CG32 403 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 FNTAP49354 379 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ADARP55265 1226 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ERVK-24P63145 666 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 DCTN2Q13561 401 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 HP1BP3Q5SSJ5 553 aaPredicted RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 NSMFQ6X4W1 530 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ENOSF1Q7L5Y1 443 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 SCUBE1Q8IWY4 988 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ACAP3Q96P50 834 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 POLD4Q9HCU8 107 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 DMAP1Q9NPF5 467 aaPredicted RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 HAO1Q9UJM8 370 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 C2CD2Q9Y426 696 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 COMMD3-BMI1R4GMX3 469 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 CPDO75976 1380 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 GOLGA8SH3BPF8 625 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 KPNA4O00629 521 aaPredicted RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 SLC26A4O43511 780 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PSMA2P25787 234 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PCNX4Q63HM2 1172 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 TRAF7Q6Q0C0 670 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PATL1Q86TB9 770 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ACTRT1Q8TDG2 376 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 WDR60Q8WVS4 1066 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 MPP4Q96JB8 637 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 STRBPQ96SI9 672 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 INTS2Q9H0H0 1204 aaKnown RBP7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ZNF212Q9UDV6 495 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 GGA1Q9UJY5 639 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ATP7AQ04656 1500 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 PALLDQ8WX93 1383 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 ABCB11O95342 1321 aa7.74□□□□□ -1.17
UBE2D3-224ENST00000508474 NCKAP5LQ9HCH0 1330 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms