RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PCBP1Q15365 356 aaKnown RBP eCLIP8.88□□□□□ -0.999e-7■□□□□ 10.8
UBE2D3-222ENST00000508238 SAFBQ15424 915 aaKnown RBP eCLIP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 CALCRLQ16602 461 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 PAN2Q504Q3 1202 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 PDE12Q6L8Q7 609 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 LRRC55Q6ZSA7 311 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 RHPN2Q8IUC4 686 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 FAM178BQ8IXR5 827 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 FBXO18Q8NFZ0 1043 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 POF1BQ8WVV4 589 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 PRPF31Q8WWY3 499 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 PPP2R3CQ969Q6 453 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 CEP170P1Q96L14 293 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 SCLT1Q96NL6 688 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 SH2D3AQ9BRG2 576 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 FDXACB1Q9BRP7 624 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 FOXP1Q9H334 677 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 CWH43Q9H720 699 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 TTC12Q9H892 705 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 IFT122Q9HBG6 1241 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 ANKEF1Q9NU02 776 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 RGL1Q9NZL6 768 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 LZTS1Q9Y250 596 aa8.88□□□□□ -0.99
UBE2D3-222ENST00000508238 CARNS1A5YM72 827 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 WNT7AO00755 349 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 NEMFO60524 1076 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 CSDE1O75534 798 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 FGF18O76093 207 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 ATF7P17544 494 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 LAG3P18627 525 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 PHKA2P46019 1235 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 HMGN5P82970 282 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 PLCB3Q01970 1234 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 CTTNQ14247 550 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 MXD4Q14582 209 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 CLLU1OSQ5K130 101 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 PLA2G4FQ68DD2 849 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 NCAPH2Q6IBW4 605 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 FERMT3Q86UX7 667 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 LRRC43Q8N309 656 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 EFHBQ8N7U6 833 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 COLGALT1Q8NBJ5 622 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 EHBP1Q8NDI1 1231 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 TCP11Q8WWU5 503 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 PSPC1Q8WXF1 523 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 DYDC2Q96IM9 177 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 C8orf76Q96K31 380 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 ZNF668Q96K58 619 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 EIF2AK1Q9BQI3 630 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 FAM50BQ9Y247 325 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 COL4A3BPQ9Y5P4 624 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 MYO10Q9HD67 2058 aa8.87□□□□□ -0.99
UBE2D3-222ENST00000508238 PLXNA4Q9HCM2 1894 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 H3BQ06 376 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 FSCN2O14926 492 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 ZBTB39O15060 712 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 DGAT1O75907 488 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 SPATA31C1P0DKV0 1188 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 FGFR4P22455 802 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 HOXA11P31270 313 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 IRS1P35568 1242 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 PPM1AP35813 382 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TXKP42681 527 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TRAPPC10P48553 1259 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 RAB27AP51159 221 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 CYP4A11Q02928 519 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 EMC2Q15006 297 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 RABEP1Q15276 862 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 XKR9Q5GH70 373 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 KCNT2Q6UVM3 1135 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 MRPL10Q7Z7H8 261 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 CCDC83Q8IWF9 413 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 ABI1Q8IZP0 508 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TMEM143Q96AN5 459 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 NLRP4Q96MN2 994 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 CDCA3Q99618 268 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 C1QTNF2Q9BXJ5 285 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 MRPL9Q9BYD2 267 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TMEM60Q9H2L4 133 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 XPNPEP1Q9NQW7 623 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 AGPAT5Q9NUQ2 364 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 CLDND1Q9NY35 253 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 PUF60Q9UHX1 559 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-222ENST00000508238 TECTAO75443 2155 aa8.85□□□□□ -0.99
UBE2D3-222ENST00000508238 EYA4O95677 639 aa8.85□□□□□ -0.99
UBE2D3-222ENST00000508238 SRGAP2CP0DJJ0 459 aa8.85□□□□□ -0.99
UBE2D3-222ENST00000508238 IL9P15248 144 aa8.85□□□□□ -0.99
UBE2D3-222ENST00000508238 IBSPP21815 317 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-222ENST00000508238 U2AF2P26368 475 aaKnown RBP eCLIP8.85□□□□□ -0.993e-9■■■□□ 15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms