RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 QPCTQ16769 361 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 TKFCQ3LXA3 575 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 EPC2Q52LR7 807 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 FAM102BQ5T8I3 360 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 AGBL2Q5U5Z8 902 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 CPNE8Q86YQ8 564 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 RAPGEF5Q92565 580 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZSWIM1Q9BR11 485 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 TMEM117Q9H0C3 514 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 DDX20Q9UHI6 824 aaKnown RBP8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 RASAL2Q9UJF2 1139 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 PNMA2Q9UL42 364 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 SYNGAP1Q96PV0 1343 aa8.21□□□□□ -1.1
PPARGC1A-204ENST00000506055 PHF20L1A8MW92 1017 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MIF4GDA9UHW6 222 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 KIAA0391O15091 583 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SPOPO43791 374 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MYCLP12524 364 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 EIF2AK2P19525 551 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 RPL21P46778 160 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MXI1P50539 228 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 HSD17B4P51659 736 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SPP2Q13103 211 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 DGKZQ13574 1117 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MYBPC2Q14324 1141 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SLC29A2Q14542 456 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 RASA3Q14644 834 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 UGCGQ16739 394 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 DENND2CQ68D51 928 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 C11orf63Q6NUN7 778 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 TTC27Q6P3X3 843 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC137Q6PK04 289 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CPLX4Q7Z7G2 160 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CBWD2Q8IUF1 395 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC105Q8IYK2 499 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZDHHC14Q8IZN3 488 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 PRELID2Q8N945 189 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 FLAD1Q8NFF5 587 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 C7orf43Q8WVR3 580 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 KIFC3Q9BVG8 833 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZNF341Q9BYN7 854 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 PABPC3Q9H361 631 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 AGO4Q9HCK5 861 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 TCEAL9Q9UHQ7 104 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CNTNAP1P78357 1384 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MYH11P35749 1972 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 FAM187AA6NFU0 413 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 PHF2O75151 1096 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ICAM1P05362 532 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ADRB2P07550 413 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CHRNB2P17787 502 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 HMGB2P26583 209 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CHRNA3P32297 505 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 KCNJ1P48048 391 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 PEX5P50542 639 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 EIF3BP55884 814 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SF3A3Q12874 501 aaKnown RBP eCLIP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CLUL1Q15846 466 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SNRNP35Q16560 246 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 UBAP2Q5T6F2 1119 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SEL1L2Q5TEA6 688 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 PLA2G4FQ68DD2 849 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 NSMFQ6X4W1 530 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 FAM71AQ8IYT1 594 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 NEK9Q8TD19 979 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 CABS1Q96KC9 395 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 KREMEN1Q96MU8 473 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 NUP85Q9BW27 656 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 TXLNGYQ9BZA5 131 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 SEMA4AQ9H3S1 761 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 DBR1Q9UK59 544 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZNF536O15090 1300 aa8.2□□□□□ -1.1
PPARGC1A-204ENST00000506055 ANKRD63C9JTQ0 380 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 P4HA2O15460 535 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ATP9AO75110 1047 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CALCAP01258 141 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ADSSP30520 456 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 HNRNPH1P31943 449 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PTGER2P43116 358 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PTGIRP43119 386 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 MFAP3P55082 362 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 HADHBP55084 474 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 GTF2BQ00403 316 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ALCAMQ13740 583 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 XKR9Q5GH70 373 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ICE2Q659A1 982 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZDHHC24Q6UX98 284 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC25Q86WR0 208 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 TEX2Q8IWB9 1127 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms