RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 DEXIO95424 95 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 EFEMP2O95967 443 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 QARSP47897 775 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 DNM2P50570 870 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 CLCN4P51793 760 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 POLGP54098 1239 aaPredicted RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 PSMC5P62195 406 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 RNASELQ05823 741 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 SPIRE1Q08AE8 756 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 LAMTOR4Q0VGL1 99 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 PPP2R5CQ13362 524 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 NONOQ15233 471 aaKnown RBP eCLIP6.55□□□□□ -1.36
GYPB-205ENST00000505583 LETM2Q2VYF4 491 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 MOXD1Q6UVY6 613 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 CABP7Q86V35 215 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 TRIM22Q8IYM9 498 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 TDRD5Q8NAT2 981 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 ST13P5Q8NFI4 369 aaPredicted RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 B3GALT6Q96L58 329 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 PHF20Q9BVI0 1012 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 EIF2AQ9BY44 585 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 DHX33Q9H6R0 707 aaKnown RBP6.55□□□□□ -1.36
GYPB-205ENST00000505583 XPNPEP1Q9NQW7 623 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 DZANK1Q9NVP4 752 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 MIOSQ9NXC5 875 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 CACNG4Q9UBN1 327 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 HES2Q9Y543 173 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 COL4A3BPQ9Y5P4 624 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 DOCK6Q96HP0 2047 aa6.55□□□□□ -1.36
GYPB-205ENST00000505583 PRR23AA6NEV1 266 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 PROB1E7EW31 1015 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 WNT7AO00755 349 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 TEX28O15482 410 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 TSPAN1O60635 241 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 RFPL2O75678 378 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CTDNEP1O95476 244 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 ALDH2P05091 517 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 SPATA31D3P0C874 917 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 KLRC2P26717 231 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 PSMA5P28066 241 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 YWHABP31946 246 aaKnown RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 RAB27AP51159 221 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CDC42EP1Q00587 391 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CYP4A11Q02928 519 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 SCRN1Q12765 414 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 GIT2Q14161 759 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CTTNQ14247 550 aaKnown RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 EMC2Q15006 297 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 KIAA0319Q5VV43 1072 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 SPATA31D4Q6ZUB0 917 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 FRMD5Q7Z6J6 570 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 FERMT3Q86UX7 667 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CDR2LQ86X02 465 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 RNF168Q8IYW5 571 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 RNF149Q8NC42 400 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 GSTCDQ8NEC7 633 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 FLCNQ8NFG4 579 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 RABGGTAQ92696 567 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 DDX12PQ92771 950 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 ZNF274Q96GC6 653 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 DYDC2Q96IM9 177 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CPB2Q96IY4 423 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CEP170P1Q96L14 293 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 GAD1Q99259 594 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 LXNQ9BS40 222 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 INO80BQ9C086 356 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 SFXN1Q9H9B4 322 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 RSAD1Q9HA92 442 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 MAN1C1Q9NR34 630 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 PRG3Q9Y2Y8 225 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 IPPQ9Y573 584 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 CYP46A1Q9Y6A2 500 aa6.54□□□□□ -1.36
GYPB-205ENST00000505583 ZFHX2Q9C0A1 2572 aaPredicted RBP6.54□□□□□ -1.36
GYPB-205ENST00000505583 CFAP54Q96N23 3096 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 CACNA1HO95180 2353 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 MYH15Q9Y2K3 1946 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 ARL5CA6NH57 179 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 CPLX1O14810 134 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 B4GALT5O43286 388 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 CCNT1O60563 726 aaKnown RBP6.53□□□□□ -1.36
GYPB-205ENST00000505583 SLITRK3O94933 977 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 REC8O95072 547 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 SOD2P04179 222 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 P4HBP07237 508 aaKnown RBP6.53□□□□□ -1.36
GYPB-205ENST00000505583 SKIP12755 728 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 FDPSP14324 419 aaKnown RBP6.53□□□□□ -1.36
GYPB-205ENST00000505583 NCLP19338 710 aaKnown RBP6.53□□□□□ -1.36
GYPB-205ENST00000505583 MLH1P40692 756 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 NBL1P41271 181 aa6.53□□□□□ -1.36
GYPB-205ENST00000505583 SCNN1GP51170 649 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms