RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 EMBQ6PCB8 327 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SYT9Q86SS6 491 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 RPAINQ86UA6 219 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 SPATS2Q86XZ4 545 aaKnown RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 FAM114A1Q8IWE2 563 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 NUP88Q99567 741 aaPredicted RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 ATP8A2Q9NTI2 1148 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 BSDC1Q9NW68 430 aaPredicted RBP4.31□□□□□ -1.72
CLTC-209ENST00000498711 HDAC6Q9UBN7 1215 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 RSPH14Q9UHP6 348 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 ZBTB1Q9Y2K1 713 aa4.31□□□□□ -1.72
CLTC-209ENST00000498711 PSME4Q14997 1843 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CCDC163A0A0D9SF12 145 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 BICDL2A1A5D9 508 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 FAM187AA6NFU0 413 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 GFRA2O00451 464 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 EIF3HO15372 352 aaKnown RBP eCLIP4.3□□□□□ -1.72
CLTC-209ENST00000498711 TPD52L2O43399 206 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 ACRP10323 421 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CPB1P15086 417 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 VEGFAP15692 232 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 TCP1P17987 556 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 CCT6AP40227 531 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 AKAP17AQ02040 695 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 DDR1Q08345 913 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ITPK1Q13572 414 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 C21orf62-AS1Q17RA5 79 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SLC10A6Q3KNW5 377 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CCDC152Q4G0S7 254 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 DNAJC21Q5F1R6 531 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 WIPI1Q5MNZ9 446 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 CCDC122Q5T0U0 273 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TRAPPC3LQ5T215 181 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 HAUS3Q68CZ6 603 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ANKRD40Q6AI12 368 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 IQCEQ6IPM2 695 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 KDM7AQ6ZMT4 941 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 UNC5AQ6ZN44 842 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 NLRC3Q7RTR2 1065 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 PTF1AQ7RTS3 328 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 JAMLQ86YT9 394 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 C3orf20Q8ND61 904 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TRIM58Q8NG06 486 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 NSUN4Q96CB9 384 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 LZTS2Q9BRK4 669 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 MMTAG2Q9BU76 263 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SEMA6BQ9H3T3 888 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CAAP1Q9H8G2 361 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 AGPAT5Q9NUQ2 364 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ZNHIT6Q9NWK9 470 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 MAGEC2Q9UBF1 373 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 MAD2L2Q9UI95 211 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 MYH1P12882 1939 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ESYT2A0FGR8 921 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TRIM49BA6NDI0 452 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 STXBP3O00186 592 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ADCY3O60266 1144 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SUSD5O60279 629 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 FSBPO95073 299 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 MYCLP1P12525 358 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 TM4SF1P30408 202 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SOX5P35711 763 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CDK8P49336 464 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 GNAQP50148 359 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 LTBP1Q14766 1721 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ZYXQ15942 572 aaKnown RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 HSP90B2PQ58FF3 399 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 PERM1Q5SV97 790 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 HYIQ5T013 277 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 KLHL10Q6JEL2 608 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 C6orf89Q6UWU4 347 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TADA2BQ86TJ2 420 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 EXOC8Q8IYI6 725 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 CNPY4Q8N129 248 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SPATA4Q8NEY3 305 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 NUP133Q8WUM0 1156 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ZNF837Q96EG3 531 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 FAM84BQ96KN1 310 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 MTMR9Q96QG7 549 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TUBGCP2Q9BSJ2 902 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TRIM9Q9C026 710 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ZMYND12Q9H0C1 365 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 TMEM60Q9H2L4 133 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 SOX17Q9H6I2 414 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 KAT14Q9H8E8 782 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 PRDM16Q9HAZ2 1276 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 DCP1AQ9NPI6 582 aaPredicted RBP4.3□□□□□ -1.72
CLTC-209ENST00000498711 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 ARHGAP20Q9P2F6 1191 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 GUCA1BQ9UMX6 200 aa4.3□□□□□ -1.72
CLTC-209ENST00000498711 KLRG2A4D1S0 409 aaPredicted RBP4.29□□□□□ -1.72
CLTC-209ENST00000498711 OPA1O60313 960 aa4.29□□□□□ -1.72
CLTC-209ENST00000498711 SRGAP2O75044 1071 aa4.29□□□□□ -1.72
CLTC-209ENST00000498711 SIN3BO75182 1162 aa4.29□□□□□ -1.72
CLTC-209ENST00000498711 NME1P15531 152 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms