RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 LRRC4CQ9HCJ2 640 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 TCP11L1Q9NUJ3 509 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.08□□□□□ -1.44
FXN-205ENST00000498653 IRAK3Q9Y616 596 aa6.08□□□□□ -1.44
FXN-205ENST00000498653 JMJD1CQ15652 2540 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 TRAK2O60296 914 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 ZBED4O75132 1171 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 SURF6O75683 361 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 BAG3O95817 575 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 IGHDP01880 384 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 CD59P13987 128 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 AKR1B1P15121 316 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 EDNRBP24530 442 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 CA8P35219 290 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 PPM1AP35813 382 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 RFX5P48382 616 aaPredicted RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 OS9Q13438 667 aaPredicted RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 TRIP6Q15654 476 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 DGKDQ16760 1214 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 MUM1L1Q5H9M0 696 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 FBXO47Q5MNV8 452 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 B4GALNT3Q6L9W6 998 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 KCNT2Q6UVM3 1135 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 CENPQQ7L2Z9 268 aaPredicted RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 PLEKHM2Q8IWE5 1019 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 KCTD15Q96SI1 283 aaPredicted RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 OCSTAMPQ9BR26 566 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 DCTPP1Q9H773 170 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 AGO3Q9H9G7 860 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 COPRSQ9NQ92 184 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 RBM12Q9NTZ6 932 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 TOR4AQ9NXH8 423 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 RAI14Q9P0K7 980 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 SEPT3Q9UH03 358 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 MBD1Q9UIS9 605 aaPredicted RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 PA2G4Q9UQ80 394 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 NOP58Q9Y2X3 529 aaKnown RBP6.07□□□□□ -1.44
FXN-205ENST00000498653 THADAQ6YHU6 1953 aa6.07□□□□□ -1.44
FXN-205ENST00000498653 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 C17orf102A2RUQ5 167 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 EYA2O00167 538 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 INPPL1O15357 1258 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 RRP8O43159 456 aaKnown RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 CIAO1O76071 339 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 DKK1O94907 266 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 CXCL14O95715 111 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 EEF2P13639 858 aaKnown RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 ENGP17813 658 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 FSHRP23945 695 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 USP5P45974 858 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 DYNLL1P63167 89 aaKnown RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 TLE1Q04724 770 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 HNRNPDQ14103 355 aaKnown RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 FAM102BQ5T8I3 360 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 LRRC55Q6ZSA7 311 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 TSHZ1Q6ZSZ6 1077 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 ERC1Q8IUD2 1116 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 SPACA3Q8IXA5 215 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 SLC39A11Q8N1S5 342 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 KXD1Q9BQD3 176 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 NOL10Q9BSC4 688 aaKnown RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 HMG20BQ9P0W2 317 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 EVLQ9UI08 416 aaPredicted RBP6.06□□□□□ -1.44
FXN-205ENST00000498653 EXOC6BQ9Y2D4 811 aa6.06□□□□□ -1.44
FXN-205ENST00000498653 MTCL1Q9Y4B5 1905 aaKnown RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 CCDC195A0A1B0GUA6 201 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 FAM149AA5PLN7 773 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 FAM187AA6NFU0 413 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 MAN2B1O00754 1011 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 DCLK1O15075 740 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 RFPL2O75678 378 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 DGAT1O75907 488 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 GH1P01241 217 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 CD52P31358 61 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 IL15P40933 162 aaPredicted RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 KRT17Q04695 432 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 LMAN2Q12907 356 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 ELF2Q15723 593 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 LY6KQ17RY6 165 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 SLFNL1Q499Z3 407 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 ANKRD45Q5TZF3 282 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 CYP26C1Q6V0L0 522 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 PPFIBP1Q86W92 1011 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 SMC5Q8IY18 1101 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 CMTR1Q8N1G2 835 aaKnown RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 SMG7Q92540 1137 aaKnown RBP6.05□□□□□ -1.44
FXN-205ENST00000498653 KIFC2Q96AC6 838 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 KIF1BPQ96EK5 621 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 ZNF558Q96NG5 402 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 LRRCC1Q9C099 1032 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 ADAMTS10Q9H324 1103 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 MAN1C1Q9NR34 630 aa6.05□□□□□ -1.44
FXN-205ENST00000498653 SPG21Q9NZD8 308 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms