RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CHRNDQ07001 517 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 ECM1Q16610 540 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 LRRC36Q1X8D7 754 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CNPY1Q3B7I2 92 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CCDC65Q8IXS2 484 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 FAM118BQ9BPY3 351 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 ALG6Q9Y672 507 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 WASF2Q9Y6W5 498 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CHD4Q14839 1912 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SPOPO43791 374 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 ATP5HO75947 161 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 GNA14O95837 355 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 KRT15P19012 456 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CHRNA3P32297 505 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SKIV2L2P42285 1042 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SLFN11Q7Z7L1 901 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CPNE8Q86YQ8 564 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SLC44A5Q8NCS7 719 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 DMAP1Q9NPF5 467 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 STRCQ7RTU9 1775 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 A0A0G2JND7 137 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 GSTA2P09210 222 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SPATA31D3P0C874 917 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 TSPY3P0CV98 308 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 TSPY8P0CW00 308 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 MYBPC3Q14896 1274 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 PPP2R5EQ16537 467 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 SPATA31D4Q6ZUB0 917 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 PALB2Q86YC2 1186 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 CEP63Q96MT8 703 aa13.98□□□□□ -0.17
GAPVD1-220ENST00000497580 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 SLIT3O75094 1523 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 PODXLO00592 558 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 FAM200BP0CF97 657 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 PTGIRP43119 386 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 WASHC2DQ5SRD0 308 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 FAM136AQ96C01 138 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 BTBD6Q96KE9 485 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 TTC1Q99614 292 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ETNK2Q9NVF9 386 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 NAALADL1Q9UQQ1 740 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 GYG2O15488 501 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 DCTN3O75935 186 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 CETPP11597 493 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 CASP4P49662 377 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ZCWPW2Q504Y3 356 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ACSBG2Q5FVE4 666 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 SCFD1Q8WVM8 642 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 TBX10O75333 385 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 BAG3O95817 575 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 EIF6P56537 245 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 THOC5Q13769 683 aaKnown RBP13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 NCAPG2Q86XI2 1143 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 ZDHHC14Q8IZN3 488 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 DTNBP1Q96EV8 351 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 MTUS1Q9ULD2 1270 aa13.97□□□□□ -0.17
GAPVD1-220ENST00000497580 T-ENOLP0DO92 83 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 YY1P25490 414 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 CASP5P51878 434 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 KRT17Q04695 432 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 C4orf50Q6ZRC1 276 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 COA7Q96BR5 231 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 DDX27Q96GQ7 796 aaKnown RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 M0R2N6 131 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 TTLL1O95922 423 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 CA4P22748 312 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 GNA11P29992 359 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 WDR4P57081 412 aaKnown RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 PPP2R5CQ13362 524 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 SEPT7Q16181 437 aaKnown RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms