RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DEF6Q9H4E7 631 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 PDLIM7Q9NR12 457 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 MYO1AQ9UBC5 1043 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 TBX20Q9UMR3 447 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 PLAGL2Q9UPG8 496 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 R3HCC1Q9Y3T6 440 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 DENND3A2RUS2 1198 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TLR3O15455 904 aaKnown RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 ASAP2O43150 1006 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 AKAP3O75969 853 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 STBD1O95210 358 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 F2P00734 622 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 GARTP22102 1010 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 RFX1P22670 979 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 HOXD13P35453 343 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 CYP2J2P51589 502 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 EFNA5P52803 228 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TFDP1Q14186 410 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 FAM43BQ6ZT52 329 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 MAP4K3Q8IVH8 894 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TSGA10Q9BZW7 698 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TTYH3Q9C0H2 523 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 FAM207AQ9NSI2 230 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
HDAC3-214ENST00000495485 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-214ENST00000495485 TRIP12Q14669 1992 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 SSU72P8A0A1W2PR75 194 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 K7ERI5 159 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ARVCFO00192 962 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 KRT86O43790 486 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 KIF5CO60282 957 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-214ENST00000495485 NDUFA10O95299 355 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 GNAT1P11488 350 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ANXA13P27216 316 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ETF1P62495 437 aaKnown RBP11.16□□□□□ -0.62
HDAC3-214ENST00000495485 BFSP1Q12934 665 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 TUBB2AQ13885 445 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 RRAGAQ7L523 313 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 VPS36Q86VN1 386 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ZBTB8OSQ8IWT0 167 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 FAM81BQ96LP2 452 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 TUBB2BQ9BVA1 445 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
HDAC3-214ENST00000495485 DCDC2CA8MYV0 355 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 EIF3CLB5ME19 914 aaKnown RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 H3BRB1 525 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 PMM2O15305 246 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 MAGEB2O15479 319 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 SORBS3O60504 671 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 SERPING1P05155 500 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 MYL3P08590 195 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 TMOD1P28289 359 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 ARL2P36404 184 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 FMO5P49326 533 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 LIG4P49917 911 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 CDK7P50613 346 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 VAMP7P51809 220 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 KCNA1Q09470 495 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 ITGA7Q13683 1181 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 TARBP2Q15633 366 aaKnown RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 PDXDC1Q6P996 788 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 KIAA1328Q86T90 577 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 PSPC1Q8WXF1 523 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms