RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 E9PMD0 336 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 SSTR3P32745 418 aaPredicted RBP17.27■□□□□ 0.36
LIMS2-216ENST00000494613 SLC11A1P49279 550 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 SMAD4Q13485 552 aaKnown RBP17.27■□□□□ 0.36
LIMS2-216ENST00000494613 KRT79Q5XKE5 535 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 SNX29Q8TEQ0 813 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
LIMS2-216ENST00000494613 GAD1Q99259 594 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 MMTAG2Q9BU76 263 aaKnown RBP17.27■□□□□ 0.36
LIMS2-216ENST00000494613 FAN1Q9Y2M0 1017 aa17.27■□□□□ 0.36
LIMS2-216ENST00000494613 ARL5CA6NH57 179 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 TTLL13PA6NNM8 815 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 PI4K2BG5E9Z4 385 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 ATP2C1P98194 919 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 CUL4AQ13619 759 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 FAM187BQ17R55 369 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 CDCA2Q69YH5 1023 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 SLC27A1Q6PCB7 646 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 ZBTB8OSQ8IWT0 167 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 ADHFE1Q8IWW8 467 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 BCL7CQ8WUZ0 217 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 APOL6Q9BWW8 343 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 TRIM6Q9C030 488 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 PRMT7Q9NVM4 692 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-216ENST00000494613 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 GIT1Q9Y2X7 761 aa17.26■□□□□ 0.35
LIMS2-216ENST00000494613 FSD2A1L4K1 749 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 NRP1O14786 923 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 INPPL1O15357 1258 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 NPTXRO95502 500 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 AKAP5P24588 427 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 NAMPTP43490 491 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 ZP2Q05996 745 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 LLGL2Q6P1M3 1020 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 SMRP1Q8NCR6 262 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 AUTS2Q8WXX7 1259 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 PRIMPOLQ96LW4 560 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 TMEM175Q9BSA9 504 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 S1PR5Q9H228 398 aa17.25■□□□□ 0.35
LIMS2-216ENST00000494613 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 ACKR2O00590 384 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 CLASP2O75122 1294 aaKnown RBP17.24■□□□□ 0.35
LIMS2-216ENST00000494613 CTSAP10619 480 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 CA8P35219 290 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 PPP2R5AQ15172 486 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 MAPK6Q16659 721 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 KCNK18Q7Z418 384 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 C1QTNF1Q9BXJ1 281 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 NXF3Q9H4D5 531 aaKnown RBP17.24■□□□□ 0.35
LIMS2-216ENST00000494613 KLK14Q9P0G3 267 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 PARP2Q9UGN5 583 aa17.24■□□□□ 0.35
LIMS2-216ENST00000494613 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 LIG1P18858 919 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 MLH1P40692 756 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 SCNN1GP51170 649 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 PRPF4BQ13523 1007 aaKnown RBP17.23■□□□□ 0.35
LIMS2-216ENST00000494613 ZRSR1Q15695 479 aaKnown RBP17.23■□□□□ 0.35
LIMS2-216ENST00000494613 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
LIMS2-216ENST00000494613 RINT1Q6NUQ1 792 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 ANKRD54Q6NXT1 300 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 SYCE2Q6PIF2 218 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 PLIN2Q99541 437 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 CCDC113Q9H0I3 377 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-216ENST00000494613 IRAK3Q9Y616 596 aa17.23■□□□□ 0.35
LIMS2-216ENST00000494613 K7ERI5 159 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 PRKCBP05771 671 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 OR1G1P47890 313 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 EFNA5P52803 228 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 DSC1Q08554 894 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 GIT2Q14161 759 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 HYIQ5T013 277 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 NT5DC1Q5TFE4 455 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 TAS1R1Q7RTX1 841 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 APOL5Q9BWW9 433 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 PDZD7Q9H5P4 517 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 HCFC2Q9Y5Z7 792 aa17.22■□□□□ 0.35
LIMS2-216ENST00000494613 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-216ENST00000494613 CCDC169A6NNP5 214 aa17.21■□□□□ 0.35
LIMS2-216ENST00000494613 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
LIMS2-216ENST00000494613 N4BP3O15049 544 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms