RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 VTA1Q9NP79 307 aa17.95■□□□□ 0.46
ATG4B-225ENST00000494465 K7ERI5 159 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-225ENST00000494465 RFX1P22670 979 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 STRN3Q13033 797 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 PRPF31Q8WWY3 499 aaKnown RBP17.94■□□□□ 0.46
ATG4B-225ENST00000494465 SYT11Q9BT88 431 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 PACSIN1Q9BY11 444 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 SMARCAD1Q9H4L7 1026 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 TOPORSQ9NS56 1045 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-225ENST00000494465 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-225ENST00000494465 HDAC6Q9UBN7 1215 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 COQ4Q9Y3A0 265 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 IVNS1ABPQ9Y6Y0 642 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 ADCY3O60266 1144 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 MOCS3O95396 460 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 ANXA13P27216 316 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 SLC26A2P50443 739 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 ENPEPQ07075 957 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 CETN1Q12798 172 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 SEMA4DQ92854 862 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 FAM213AQ9BRX8 229 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 ZNF236Q9UL36 1845 aa17.94■□□□□ 0.46
ATG4B-225ENST00000494465 DOCK3Q8IZD9 2030 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 EVPLQ92817 2033 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 EXTL3O43909 919 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 MAP2K1Q02750 393 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 IER5Q5VY09 327 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 RSRC2Q7L4I2 434 aaKnown RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 TRIM58Q8NG06 486 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 ZBTB45Q96K62 511 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 TMEM8AQ9HCN3 771 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 ANO9A1A5B4 782 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 KRT39Q6A163 491 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 TXLNBQ8N3L3 684 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 TRAPPC12Q8WVT3 735 aa17.93■□□□□ 0.46
ATG4B-225ENST00000494465 PSPC1Q8WXF1 523 aaKnown RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 TARS2Q9BW92 718 aaKnown RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 UBE2TQ9NPD8 197 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-225ENST00000494465 FOXN3O00409 490 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-225ENST00000494465 DDX3XO00571 662 aaKnown RBP eCLIP17.92■□□□□ 0.462e-7■■□□□ 13.3
ATG4B-225ENST00000494465 GAS2O43903 313 aaKnown RBP17.92■□□□□ 0.46
ATG4B-225ENST00000494465 GTF2H1P32780 548 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 HUNKP57058 714 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 NLRP11P59045 1033 aaKnown RBP17.92■□□□□ 0.46
ATG4B-225ENST00000494465 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 NAB2Q15742 525 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 ARHGAP44Q17R89 818 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 CDCA2Q69YH5 1023 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-225ENST00000494465 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 EMID1Q96A84 441 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-225ENST00000494465 MAML3Q96JK9 1138 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 RNPEPQ9H4A4 650 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 ADGRA2Q96PE1 1338 aa17.92■□□□□ 0.46
ATG4B-225ENST00000494465 ZNF233A6NK53 670 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 TTLL13PA6NNM8 815 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 TACC1O75410 805 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 KLRC1P26715 233 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 ADCYAP1R1P41586 468 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 WNT7BP56706 349 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 CLDN10P78369 228 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 LAMTOR4Q0VGL1 99 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 KIAA0753Q2KHM9 967 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 C10orf76Q5T2E6 689 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 PLEKHH3Q7Z736 793 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 RNF10Q8N5U6 811 aaKnown RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 LNX1Q8TBB1 728 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 SUGCTQ9HAC7 445 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 KIAA1586Q9HCI6 787 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 LUC7LQ9NQ29 371 aaKnown RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 AGO2Q9UKV8 859 aaKnown RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 A0A0B4J269 797 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 HBP1O60381 514 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 GH1P01241 217 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 GPC3P51654 580 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 KIF22Q14807 665 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 WHAMMP3Q1A5X7 153 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 ALKBH5Q6P6C2 394 aaKnown RBP17.91■□□□□ 0.46
ATG4B-225ENST00000494465 SV2AQ7L0J3 742 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 TCP11Q8WWU5 503 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 UBXN4Q92575 508 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 KAT5Q92993 513 aa17.91■□□□□ 0.46
ATG4B-225ENST00000494465 IGF2BP3O00425 579 aaKnown RBP eCLIP17.9■□□□□ 0.46
ATG4B-225ENST00000494465 KIAA0391O15091 583 aaKnown RBP17.9■□□□□ 0.46
ATG4B-225ENST00000494465 MSCO60682 206 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 LGALS2P05162 132 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 MAPK4P31152 587 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 PSMD6Q15008 389 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 SLFN12LQ6IEE8 588 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 C15orf39Q6ZRI6 1047 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 DNAAF5Q86Y56 855 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms