RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 DPCR1Q3MIW9 517 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 AASDHQ4L235 1098 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TMEM154Q6P9G4 183 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 SCN4BQ8IWT1 228 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 AHI1Q8N157 1196 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TBCKQ8TEA7 893 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 IP6K1Q92551 441 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 OMA1Q96E52 524 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TMA16Q96EY4 203 aaKnown RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 C17orf80Q9BSJ5 609 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TNRQ92752 1358 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 SNTNA6NMZ2 147 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TSC22D2O75157 780 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 COPB2P35606 906 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 HSPA9P38646 679 aaKnown RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 TERF2Q15554 542 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 KLHL24Q6TFL4 600 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 C11orf57Q6ZUT1 292 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-221ENST00000493795 DDHD1Q8NEL9 900 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 RMDN1Q96DB5 314 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 UBAP1Q9NZ09 502 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 CEP72Q9P209 647 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 ADAM30Q9UKF2 790 aa8.31□□□□□ -1.08
BRCA1-221ENST00000493795 FAM187AA6NFU0 413 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 GPS1Q13098 491 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SPATA21Q7Z572 469 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PCYOX1LQ8NBM8 494 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ATP6V1G3Q96LB4 118 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 DDX50Q9BQ39 737 aaKnown RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 RAD21L1Q9H4I0 556 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 KIAA1586Q9HCI6 787 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ZC3H7BQ9UGR2 993 aaKnown RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 DNAJC12Q9UKB3 198 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SEMA3EO15041 775 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PPP3CCP48454 512 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 STX3Q13277 289 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF235Q14590 738 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SHROOM1Q2M3G4 852 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF699Q32M78 642 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ARMCX4Q5H9R4 360 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 C6orf10Q5SRN2 563 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 FBXO38Q6PIJ6 1188 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 AGR3Q8TD06 166 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CENPTQ96BT3 561 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 TSPAN17Q96FV3 270 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 HES6Q96HZ4 224 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 OLFM1Q99784 485 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CLEC4MQ9H2X3 399 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SYNDIG1Q9H7V2 258 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 TOPORSQ9NS56 1045 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ADAM21Q9UKJ8 722 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 TTC7AQ9ULT0 858 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 K7ERI5 159 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 HSPA13P48723 471 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 KDSRQ06136 332 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SCRN1Q12765 414 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CATSPER4Q7RTX7 472 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 RHPN2Q8IUC4 686 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SLC52A2Q9HAB3 445 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PCDHB8Q9UN66 801 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 MFAP3LO75121 409 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 GGPS1O95749 300 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 MLNP12872 115 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PDXDC2PQ6P474 469 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ADCK2Q7Z695 626 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 BEST2Q8NFU1 509 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 VIPAS39Q9H9C1 493 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 BCS1LQ9Y276 419 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 NPATQ14207 1427 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 PNMA6EA0A0J9YXQ4 647 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 ANKRD65E5RJM6 399 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 M0QYV0 167 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 TLR2O60603 784 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 MLH1P40692 756 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 GYS2P54840 703 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SYDE2Q5VT97 1194 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 KIAA0825Q8IV33 1275 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SPATA16Q9BXB7 569 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 SAMSN1Q9NSI8 373 aaKnown RBP8.3□□□□□ -1.08
BRCA1-221ENST00000493795 BTG4Q9NY30 223 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 USP19O94966 1318 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 CARMIL3Q8ND23 1372 aa8.3□□□□□ -1.08
BRCA1-221ENST00000493795 A0A0D9SFI3 127 aa8.29□□□□□ -1.08
BRCA1-221ENST00000493795 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
BRCA1-221ENST00000493795 PSMD3O43242 534 aa8.29□□□□□ -1.08
BRCA1-221ENST00000493795 MYL3P08590 195 aa8.29□□□□□ -1.08
BRCA1-221ENST00000493795 TRIM49P0CI25 452 aa8.29□□□□□ -1.08
BRCA1-221ENST00000493795 TRIM49CP0CI26 452 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms