RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 KIF17Q9P2E2 1029 aa21.32■■□□□ 1
RNF40-203ENST00000493683 PPP1R37O75864 691 aa21.32■■□□□ 1
RNF40-203ENST00000493683 ZNF302Q9NR11 478 aa21.32■■□□□ 1
RNF40-203ENST00000493683 RNF219Q5W0B1 726 aaPredicted RBP21.32■■□□□ 1
RNF40-203ENST00000493683 ZC4H2Q9NQZ6 224 aa21.32■■□□□ 1
RNF40-203ENST00000493683 POTEB3A0JP26 581 aa21.31■■□□□ 1
RNF40-203ENST00000493683 POTECB2RU33 542 aa21.31■■□□□ 1
RNF40-203ENST00000493683 POTEBQ6S5H4 581 aa21.31■■□□□ 1
RNF40-203ENST00000493683 OXER1Q8TDS5 423 aa21.31■■□□□ 1
RNF40-203ENST00000493683 EPN3Q9H201 632 aa21.31■■□□□ 1
RNF40-203ENST00000493683 UVRAGQ9P2Y5 699 aa21.31■■□□□ 1
RNF40-203ENST00000493683 NCK2O43639 380 aa21.31■■□□□ 1
RNF40-203ENST00000493683 RXRBP28702 533 aa21.31■■□□□ 1
RNF40-203ENST00000493683 NEK2P51955 445 aa21.31■■□□□ 1
RNF40-203ENST00000493683 ABCE1P61221 599 aaKnown RBP21.31■■□□□ 1
RNF40-203ENST00000493683 MRPS25P82663 173 aaKnown RBP21.31■■□□□ 1
RNF40-203ENST00000493683 HIC1Q14526 733 aa21.31■■□□□ 1
RNF40-203ENST00000493683 DNAL1Q4LDG9 190 aa21.31■■□□□ 1
RNF40-203ENST00000493683 TUFT1Q9NNX1 390 aa21.31■■□□□ 1
RNF40-203ENST00000493683 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
RNF40-203ENST00000493683 BATF3Q9NR55 127 aa21.31■■□□□ 1
RNF40-203ENST00000493683 SMAPO00193 183 aa21.31■■□□□ 1
RNF40-203ENST00000493683 COPB2P35606 906 aa21.31■■□□□ 1
RNF40-203ENST00000493683 ZNF394Q53GI3 561 aa21.31■■□□□ 1
RNF40-203ENST00000493683 PASD1Q8IV76 773 aa21.31■■□□□ 1
RNF40-203ENST00000493683 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
RNF40-203ENST00000493683 SHROOM2Q13796 1616 aa21.31■■□□□ 1
RNF40-203ENST00000493683 TYK2P29597 1187 aa21.31■■□□□ 1
RNF40-203ENST00000493683 SERPINB10P48595 397 aa21.31■■□□□ 1
RNF40-203ENST00000493683 ZNF211Q13398 564 aaPredicted RBP21.31■■□□□ 1
RNF40-203ENST00000493683 AGGF1Q8N302 714 aaeCLIP21.31■■□□□ 1
RNF40-203ENST00000493683 AGPAT1Q99943 283 aa21.31■■□□□ 1
RNF40-203ENST00000493683 TRIM54Q9BYV2 358 aa21.31■■□□□ 1
RNF40-203ENST00000493683 TTC7AQ9ULT0 858 aaPredicted RBP21.31■■□□□ 1
RNF40-203ENST00000493683 MEFVO15553 781 aaPredicted RBP21.3■■□□□ 1
RNF40-203ENST00000493683 PSMD3O43242 534 aa21.3■■□□□ 1
RNF40-203ENST00000493683 ESRRBO95718 433 aa21.3■■□□□ 1
RNF40-203ENST00000493683 CRKP46108 304 aa21.3■■□□□ 1
RNF40-203ENST00000493683 RNPC3Q96LT9 517 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 ATP1A1P05023 1023 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 KITP10721 976 aa21.3■■□□□ 1
RNF40-203ENST00000493683 MDH1P40925 334 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 HIF1AQ16665 826 aa21.3■■□□□ 1
RNF40-203ENST00000493683 DALRD3Q5D0E6 543 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 EEPD1Q7L9B9 569 aa21.3■■□□□ 1
RNF40-203ENST00000493683 GSPT2Q8IYD1 628 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 LZICQ8WZA0 190 aa21.3■■□□□ 1
RNF40-203ENST00000493683 DTNBP1Q96EV8 351 aa21.3■■□□□ 1
RNF40-203ENST00000493683 OSBPL1AQ9BXW6 950 aa21.3■■□□□ 1
RNF40-203ENST00000493683 RCOR2Q8IZ40 523 aa21.3■■□□□ 1
RNF40-203ENST00000493683 YIPF3Q9GZM5 350 aa21.3■■□□□ 1
RNF40-203ENST00000493683 MROH7-TTC4A0A0A0MT08 1334 aa21.3■■□□□ 1
RNF40-203ENST00000493683 TEX33O43247 280 aa21.3■■□□□ 1
RNF40-203ENST00000493683 KRT16P08779 473 aa21.3■■□□□ 1
RNF40-203ENST00000493683 MARK3P27448 753 aa21.3■■□□□ 1
RNF40-203ENST00000493683 CAPRIN2Q6IMN6 1127 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 SH3TC2Q8TF17 1288 aa21.3■■□□□ 1
RNF40-203ENST00000493683 PIGBQ92521 554 aa21.3■■□□□ 1
RNF40-203ENST00000493683 PBXIP1Q96AQ6 731 aa21.3■■□□□ 1
RNF40-203ENST00000493683 MMTAG2Q9BU76 263 aaKnown RBP21.3■■□□□ 1
RNF40-203ENST00000493683 COG4Q9H9E3 785 aa21.3■■□□□ 1
RNF40-203ENST00000493683 GPBP1L1Q9HC44 474 aaPredicted RBP21.3■■□□□ 1
RNF40-203ENST00000493683 PITPNM2Q9BZ72 1349 aa21.3■■□□□ 1
RNF40-203ENST00000493683 EYA4O95677 639 aa21.29■■□□□ 1
RNF40-203ENST00000493683 KRT17Q04695 432 aa21.29■■□□□ 1
RNF40-203ENST00000493683 EPHA7Q15375 998 aa21.29■■□□□ 1
RNF40-203ENST00000493683 STILQ15468 1287 aa21.29■■□□□ 1
RNF40-203ENST00000493683 CCSER1Q9C0I3 900 aa21.29■■□□□ 1
RNF40-203ENST00000493683 E5RI56 91 aa21.29■■□□□ 1
RNF40-203ENST00000493683 RAD17O75943 681 aa21.29■■□□□ 1
RNF40-203ENST00000493683 AP1B1Q10567 949 aa21.29■■□□□ 1
RNF40-203ENST00000493683 NCAPHQ15003 741 aa21.29■■□□□ 1
RNF40-203ENST00000493683 TTC23LQ6PF05 361 aa21.29■■□□□ 1
RNF40-203ENST00000493683 SHC4Q6S5L8 630 aa21.29■■□□□ 1
RNF40-203ENST00000493683 SGSM3Q96HU1 749 aa21.29■■□□□ 1
RNF40-203ENST00000493683 HACD3Q9P035 362 aa21.29■■□□□ 1
RNF40-203ENST00000493683 MBD5Q9P267 1494 aa21.29■■□□□ 1
RNF40-203ENST00000493683 A0A1B0GTH6 734 aa21.29■■□□□ 1
RNF40-203ENST00000493683 ESYT3A0FGR9 886 aa21.29■■□□□ 1
RNF40-203ENST00000493683 PDHA1P08559 390 aa21.29■■□□□ 1
RNF40-203ENST00000493683 PCYT1AP49585 367 aa21.29■■□□□ 1
RNF40-203ENST00000493683 INPP5AQ14642 412 aa21.29■■□□□ 1
RNF40-203ENST00000493683 AGBL2Q5U5Z8 902 aa21.29■■□□□ 1
RNF40-203ENST00000493683 WDR35Q9P2L0 1181 aa21.29■■□□□ 1
RNF40-203ENST00000493683 APOL1O14791 398 aa21.29■■□□□ 1
RNF40-203ENST00000493683 ITIH2P19823 946 aa21.29■■□□□ 1
RNF40-203ENST00000493683 EFNA5P52803 228 aa21.29■■□□□ 1
RNF40-203ENST00000493683 DACH2Q96NX9 599 aa21.29■■□□□ 1
RNF40-203ENST00000493683 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.29■■□□□ 1
RNF40-203ENST00000493683 CFAP69A5D8W1 941 aa21.28■■□□□ 1
RNF40-203ENST00000493683 PATL1Q86TB9 770 aaKnown RBP21.28■■□□□ 1
RNF40-203ENST00000493683 TTLL6Q8N841 843 aa21.28■■□□□ 1
RNF40-203ENST00000493683 SLC26A7Q8TE54 656 aa21.28■■□□□ 1
RNF40-203ENST00000493683 PAWRQ96IZ0 340 aaKnown RBP21.28■■□□□ 1
RNF40-203ENST00000493683 CEP170Q5SW79 1584 aa21.28■■□□□ 1
RNF40-203ENST00000493683 RPS6KA4O75676 772 aa21.28■■□□□ 1
RNF40-203ENST00000493683 PRAMEP78395 509 aa21.28■■□□□ 1
RNF40-203ENST00000493683 PTK2BQ14289 1009 aa21.28■■□□□ 1
RNF40-203ENST00000493683 LRRC8BQ6P9F7 803 aa21.28■■□□□ 1
RNF40-203ENST00000493683 PALLDQ8WX93 1383 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms