RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RNF14Q9UBS8 474 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TCRBV7S2A1N4TA0A589 114 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 HNRNPDLO14979 420 aaKnown RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 ZBED4O75132 1171 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM253P0C7T8 217 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 GTF2BQ00403 316 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 PPATQ06203 517 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 NFIL3Q16649 462 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 MTERF2Q49AM1 385 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 CEP85LQ5SZL2 805 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 EPS8L1Q8TE68 723 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 POMGNT1Q8WZA1 660 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 SH3GL2Q99962 352 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TRIM7Q9C029 511 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 SUCLA2Q9P2R7 463 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 BRCA2P51587 3418 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 NCANO14594 1321 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 ZEB2O60315 1214 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 CHRNB2P17787 502 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 GUCY1A3Q02108 690 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM132BQ14DG7 1078 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 C10orf67Q8IYJ2 551 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 BICD1Q96G01 975 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 PBKQ96KB5 322 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM206Q9H813 350 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 TBC1D22BQ9NU19 505 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 ALG6Q9Y672 507 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 PARP14Q460N5 1801 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 HARSP12081 509 aaKnown RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 HSD17B3P37058 310 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 BACE1P56817 501 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 KIF22Q14807 665 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 SPOPLQ6IQ16 392 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 ZDHHC14Q8IZN3 488 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 FAM213AQ9BRX8 229 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
HMGN1-220ENST00000492280 TNFRSF8P28908 595 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 SP2Q02086 613 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 PDE4CQ08493 712 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 TNFAIP1Q13829 316 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 EEPD1Q7L9B9 569 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 IQCKQ8N0W5 287 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
HMGN1-220ENST00000492280 R3HDMLQ9H3Y0 253 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 XPNPEP1Q9NQW7 623 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
HMGN1-220ENST00000492280 ANKRD62A6NC57 917 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 KRT5P13647 590 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 PTPRAP18433 802 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 MUTP22033 750 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 CCT5P48643 541 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 IRAK1P51617 712 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 NCKAP1LP55160 1127 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 PRKCEQ02156 737 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 CNTN2Q02246 1040 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 ZBTB41Q5SVQ8 909 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 C4orf19Q8IY42 314 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF668Q96K58 619 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-220ENST00000492280 CAPS2Q9BXY5 557 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 FAM107BQ9H098 131 aa13.43□□□□□ -0.26
HMGN1-220ENST00000492280 A1CFQ9NQ94 594 aaKnown RBP13.43□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-220ENST00000492280 RLFQ13129 1914 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 DCDC2CA8MYV0 355 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 ACOT2P49753 483 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 TAS1R3Q7RTX0 852 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 SYCE1Q8N0S2 351 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 ZBTB45Q96K62 511 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-220ENST00000492280 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
HMGN1-220ENST00000492280 ISCUQ9H1K1 167 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 A0A0A6YYK5 440 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-220ENST00000492280 KCNA2P16389 499 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 COMTP21964 271 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 FMO1Q01740 532 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 VSIG10LQ86VR7 867 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
HMGN1-220ENST00000492280 PTPN22Q9Y2R2 807 aa13.42□□□□□ -0.26
HMGN1-220ENST00000492280 RRP15Q9Y3B9 282 aaKnown RBP13.42□□□□□ -0.26
HMGN1-220ENST00000492280 SMIM23A6NLE4 172 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 CTNNA1P35221 906 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms