RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 ABLIM1O14639 778 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 ZNF202O95125 648 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 EOMESO95936 686 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 STAG3L1P0CL83 205 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 IDEP14735 1019 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 CASP5P51878 434 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 ZC2HC1CQ53FD0 456 aaPredicted RBP15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 SLC27A1Q6PCB7 646 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 FAM178BQ8IXR5 827 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 CEP57L1Q8IYX8 460 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 ACO2Q99798 780 aaKnown RBP15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 TARS2Q9BW92 718 aaKnown RBP15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 STRA6Q9BX79 667 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 NXF3Q9H4D5 531 aaKnown RBP15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 PTPRHQ9HD43 1115 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 PANK4Q9NVE7 773 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 TBC1D7Q9P0N9 293 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 HCSTQ9UBK5 93 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 LRFN2Q9ULH4 789 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 IPPQ9Y573 584 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 MYO9BQ13459 2157 aa15.82■□□□□ 0.12
SRGAP3-208ENST00000490348 PPP1R37O75864 691 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 NPTXRO95502 500 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 GAP43P17677 238 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 PROZP22891 400 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 RAB27AP51159 221 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 AFF1P51825 1210 aaKnown RBP15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 GTF2BQ00403 316 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 AMPD3Q01432 767 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 EHHADHQ08426 723 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 NCBP1Q09161 790 aaKnown RBP15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 COASYQ13057 564 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 PAN2Q504Q3 1202 aaKnown RBP15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 ATF7IP2Q5U623 682 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 PPP2R2DQ66LE6 453 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 AGMOQ6ZNB7 445 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 ZNF720Q7Z2F6 126 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 GLIS3Q8NEA6 775 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 CASD1Q96PB1 797 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 IKZF4Q9H2S9 585 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 ST6GALNAC4Q9H4F1 302 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 ZNF576Q9H609 170 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 OLFML3Q9NRN5 406 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 USP25Q9UHP3 1055 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 TBX20Q9UMR3 447 aa15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
SRGAP3-208ENST00000490348 EPOPA6NHQ4 379 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 ASIC1P78348 528 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 KCNA1Q09470 495 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 KRBA2Q6ZNG9 492 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 LRRC55Q6ZSA7 311 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 FAM161BQ96MY7 647 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 MRPL4Q9BYD3 311 aaKnown RBP15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 LRRC27Q9C0I9 530 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 SLC28A3Q9HAS3 691 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 SEL1LQ9UBV2 794 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 TNFSF13BQ9Y275 285 aa15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 MRPL42Q9Y6G3 142 aaKnown RBP15.8■□□□□ 0.12
SRGAP3-208ENST00000490348 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 GOLGA6L4A6NEF3 574 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 TBKBP1A7MCY6 615 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 N4BP3O15049 544 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 KLRC4O43908 158 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 NR1I2O75469 434 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 MYBP10242 640 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 SKIP12755 728 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CCDC65Q8IXS2 484 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CMTR2Q8IYT2 770 aaKnown RBP15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 HELQQ8TDG4 1101 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 ZBTB45Q96K62 511 aaPredicted RBP15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 HAPLN2Q9GZV7 340 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 MRPL44Q9H9J2 332 aaKnown RBP15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CERS4Q9HA82 394 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 UNC80Q8N2C7 3258 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 H0YCG3 227 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 OFD1O75665 1012 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 FAM160A1Q05DH4 1040 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 STRN3Q13033 797 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 BTG3Q14201 252 aaPredicted RBP15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 GRIN2CQ14957 1233 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CSPP1Q1MSJ5 1256 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 TMEM132AQ24JP5 1023 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 ZNF697Q5TEC3 545 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 SLC39A4Q6P5W5 647 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 UNC13DQ70J99 1090 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 MAP4K3Q8IVH8 894 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CNNM3Q8NE01 707 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CLP1Q92989 425 aaKnown RBP15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 TMEM117Q9H0C3 514 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CDT1Q9H211 546 aa15.79■□□□□ 0.12
SRGAP3-208ENST00000490348 CXCL16Q9H2A7 254 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms