RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ZNF335Q9H4Z2 1342 aaPredicted RBP6.8□□□□□ -1.32
SIK3-212ENST00000488337 PIK3CDO00329 1044 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ZNF213O14771 459 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 RNASEH1O60930 286 aaKnown RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 CMA1P23946 247 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PCSK6P29122 969 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PIP4K2AP48426 406 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 VPS41P49754 854 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ACVR2BQ13705 512 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 EPHA7Q15375 998 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 FAM171BQ6P995 826 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 USP43Q70EL4 1123 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 SPARTQ8N0X7 666 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 AGGF1Q8N302 714 aaeCLIP6.79□□□□□ -1.32
SIK3-212ENST00000488337 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 CASKIN2Q8WXE0 1202 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 CAPZA3Q96KX2 299 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ZNF184Q99676 751 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 TXLNGYQ9BZA5 131 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 THAP9Q9H5L6 903 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 POLR3EQ9NVU0 708 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 THAP1Q9NVV9 213 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 NFU1Q9UMS0 254 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ZBTB1Q9Y2K1 713 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 CLIC4Q9Y696 253 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 C3P01024 1663 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 UMODL1Q5DID0 1318 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 NRKQ7Z2Y5 1582 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 IDH3BO43837 385 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 NDUFA10O95299 355 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 IGKV5-2P06315 115 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 HSPD1P10809 573 aaKnown RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 TBXAS1P24557 533 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 TMED10P49755 219 aaKnown RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 VAV2P52735 878 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 NIPAL4Q0D2K0 466 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 INSCQ1MX18 579 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 SPDYAQ5MJ70 313 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ZNF790Q6PG37 636 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 SATL1Q86VE3 508 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 METTL16Q86W50 562 aaKnown RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 PYROXD1Q8WU10 500 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PMM1Q92871 262 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 KAZALD1Q96I82 304 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 COX4I2Q96KJ9 171 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 INPP4AQ96PE3 977 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 STK38LQ9Y2H1 464 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 USP15Q9Y4E8 981 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 FUCA1P04066 466 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PFKFB1P16118 471 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PTPN12Q05209 780 aaKnown RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 RNF43Q68DV7 783 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 ZNF772Q68DY9 489 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 IFT20Q8IY31 132 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 NCOA7Q8NI08 942 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 INO80BQ9C086 356 aaPredicted RBP6.79□□□□□ -1.32
SIK3-212ENST00000488337 HMGXB4Q9UGU5 601 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 PPP1R9AQ9ULJ8 1098 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 CARMIL3Q8ND23 1372 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 MST1RQ04912 1400 aa6.79□□□□□ -1.32
SIK3-212ENST00000488337 OR5K4A6NMS3 321 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CTDNEP1O95476 244 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 EYA4O95677 639 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 GSSP48637 474 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 NEK3P51956 506 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 DR1Q01658 176 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CHRNEQ04844 493 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 NONOQ15233 471 aaKnown RBP eCLIP6.78□□□□□ -1.32
SIK3-212ENST00000488337 CYTH1Q15438 398 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 EPHA10Q5JZY3 1008 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 TTC39AQ5SRH9 613 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CGB2Q6NT52 195 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 LRRC74BQ6ZQY2 392 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 C11orf96Q7Z7L8 435 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ALG1Q9BT22 464 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SNX25Q9H3E2 840 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SELENONQ9NZV5 590 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 USP21Q9UK80 565 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 MYH10P35580 1976 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 GAKO14976 1311 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 T-ENOLP0DO92 83 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CRABP2P29373 138 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 HMOX2P30519 316 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SLC5A2P31639 672 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 CABP4P57796 275 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 NAA20P61599 178 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 SEPT7Q16181 437 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 KHDC1Q4VXA5 237 aaKnown RBP6.78□□□□□ -1.32
SIK3-212ENST00000488337 ZCWPW2Q504Y3 356 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 VPS52Q8N1B4 723 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ELMOD1Q8N336 334 aa6.78□□□□□ -1.32
SIK3-212ENST00000488337 ATP6V0D2Q8N8Y2 350 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms