RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 INO80B-WBP1J3KQ70 363 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 PRKD3O94806 890 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 ABHD16AO95870 558 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 CYP17A1P05093 508 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 ITGB1P05556 798 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 APEX1P27695 318 aaKnown RBP4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 LSP1P33241 339 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 PHC1P78364 1004 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 SMAD3P84022 425 aaKnown RBP4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 TMEM132BQ14DG7 1078 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 PTPAQ15257 358 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 LY6G5CQ5SRR4 150 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 GPR158Q5T848 1215 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 HECTD2Q5U5R9 776 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 PAPD7Q5XG87 772 aaKnown RBP4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 MB21D1Q8N884 522 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 MTMR8Q96EF0 704 aa4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 INO80BQ9C086 356 aaPredicted RBP4.79□□□□□ -1.64
SNRNP27-204ENST00000487029 K7ESF4 209 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 FOXP2O15409 715 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 MAFO75444 373 aaPredicted RBP4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 ALDH1L1O75891 902 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 SDHAP31040 664 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 FNTBP49356 437 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 TCIRG1Q13488 830 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 LRRC32Q14392 662 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 TERF2Q15554 542 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 SYDE2Q5VT97 1194 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 BROXQ5VW32 411 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 LRRC55Q6ZSA7 311 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 ZZZ3Q8IYH5 903 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 CLRN3Q8NCR9 226 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 JDP2Q8WYK2 163 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 LPPQ93052 612 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 TCF25Q9BQ70 676 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 R3HDMLQ9H3Y0 253 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 TRHDEQ9UKU6 1024 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 ASB1Q9Y576 335 aa4.78□□□□□ -1.64
SNRNP27-204ENST00000487029 H2AFYO75367 372 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 ERBB2P04626 1255 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 CD40P25942 277 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 TTF1Q15361 905 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 EPHA7Q15375 998 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 CATSPEREQ5SY80 951 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 ESRP1Q6NXG1 681 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 KCNV1Q6PIU1 500 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 ZNF610Q8N9Z0 462 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 GCDHQ92947 438 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 NKD2Q969F2 451 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 FOXRED1Q96CU9 486 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 AHCYL2Q96HN2 611 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 SMAD5Q99717 465 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 CCDC8Q9H0W5 538 aaPredicted RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 TOR3AQ9H497 397 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 ZNF768Q9H5H4 540 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 VTA1Q9NP79 307 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 DENND2AQ9ULE3 1009 aa4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 G3BP2Q9UN86 482 aaKnown RBP4.77□□□□□ -1.65
SNRNP27-204ENST00000487029 GOLGA8BA8MQT2 603 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 GOLGA6L6A8MZA4 724 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 GABRDO14764 452 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 B3GALT2O43825 422 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 STC2O76061 302 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 EPHB1P54762 984 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 ERVK-21P61565 698 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 ADCY1Q08828 1119 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 STRIP1Q5VSL9 837 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 RTN4RL1Q86UN2 441 aaPredicted RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 NME9Q86XW9 330 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 MDGA1Q8NFP4 955 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 ERCC4Q92889 916 aaPredicted RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 ZNF512Q96ME7 567 aaPredicted RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 SAE1Q9UBE0 346 aaPredicted RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 SORCS3Q9UPU3 1222 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 THRAP3Q9Y2W1 955 aaKnown RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 NOC2LQ9Y3T9 749 aaKnown RBP4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
SNRNP27-204ENST00000487029 WASHC2AQ641Q2 1341 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 MARCH6O60337 910 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 LPXNO60711 386 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 CD38P28907 300 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 NEK2P51955 445 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 KLF1Q13351 362 aaPredicted RBP4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 NAIF1Q69YI7 327 aaPredicted RBP4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 FRMD7Q6ZUT3 714 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 CBARPQ8N350 705 aaPredicted RBP4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 CPT1CQ8TCG5 803 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 CALML6Q8TD86 181 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 GFM2Q969S9 779 aaKnown RBP4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 TOPORSQ9NS56 1045 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms