RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 POMCP01189 267 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 EFNA5P52803 228 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 DMP1Q13316 513 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 SMC1AQ14683 1233 aaKnown RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 AMHR2Q16671 573 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 MRPL10Q7Z7H8 261 aaKnown RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 CDR2LQ86X02 465 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 HSCBQ8IWL3 235 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 EFHBQ8N7U6 833 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 SMG8Q8ND04 991 aaKnown RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 RPS6KC1Q96S38 1066 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 CDCA3Q99618 268 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-208ENST00000486404 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 KIFC3Q9BVG8 833 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 HES2Q9Y543 173 aa14.23□□□□□ -0.13
CHMP3-208ENST00000486404 SPTBN5Q9NRC6 3674 aaKnown RBP14.22□□□□□ -0.13
CHMP3-208ENST00000486404 PHLPP2Q6ZVD8 1323 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 BDP1A6H8Y1 2624 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CCDC169A6NNP5 214 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 FSCN2O14926 492 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 LINC01565O15544 149 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 HIP1RO75146 1068 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 IL9P15248 144 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 UBA7P41226 1012 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 ERVFC1P60507 584 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 FAM187BQ17R55 369 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CTC1Q2NKJ3 1217 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CABP7Q86V35 215 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 AK8Q96MA6 479 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 PLIN2Q99541 437 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 MMTAG2Q9BU76 263 aaKnown RBP14.22□□□□□ -0.13
CHMP3-208ENST00000486404 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 NRDE2Q9H7Z3 1164 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CD207Q9UJ71 328 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 CITO14578 2027 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
CHMP3-208ENST00000486404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 ARL5CA6NH57 179 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 PER2O15055 1255 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 NR1I2O75469 434 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SYT1P21579 422 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SSTR3P32745 418 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SLC11A1P49279 550 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SCNN1GP51170 649 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SMAD4Q13485 552 aaKnown RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 IGSF21Q96ID5 467 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 ZFP42Q96MM3 310 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 GAD1Q99259 594 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 TMEM175Q9BSA9 504 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 TIPINQ9BVW5 301 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 FZD8Q9H461 694 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 DNAJB4Q9UDY4 337 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 STK39Q9UEW8 545 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 BARX2Q9UMQ3 279 aaPredicted RBP14.21□□□□□ -0.13
CHMP3-208ENST00000486404 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.13
CHMP3-208ENST00000486404 TRIP11Q15643 1979 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 A0A1B0GUA9 196 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 GRXCR2A6NFK2 248 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 SLC26A4O43511 780 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 GALTP07902 379 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 AKAP5P24588 427 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 LONP1P36776 959 aaKnown RBP14.2□□□□□ -0.14
CHMP3-208ENST00000486404 LTBRP36941 435 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 OR1G1P47890 313 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 PEX3P56589 373 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 DLX2Q07687 328 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-208ENST00000486404 RAD51AP2Q09MP3 1159 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 GRIK3Q13003 919 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 ADAM15Q13444 863 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 DUSP6Q16828 381 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 DCAF4L1Q3SXM0 396 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 HYIQ5T013 277 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 RINT1Q6NUQ1 792 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 TMEM173Q86WV6 379 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-208ENST00000486404 ZNF280BQ86YH2 543 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 VPS52Q8N1B4 723 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 KCTD17Q8N5Z5 321 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 POLD4Q9HCU8 107 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 KMT5AQ9NQR1 393 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 FAN1Q9Y2M0 1017 aa14.2□□□□□ -0.14
CHMP3-208ENST00000486404 PRG3Q9Y2Y8 225 aaPredicted RBP14.2□□□□□ -0.14
CHMP3-208ENST00000486404 HIDE1A8MVS5 230 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 ACKR2O00590 384 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 B4GALT3O60512 393 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 DDHD2O94830 711 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
CHMP3-208ENST00000486404 PLA2G4BP0C869 781 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 TXLNAP40222 546 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms