RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TECP42680 631 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PRIM2P49643 509 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 SEPHS1P49903 392 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 KIF23Q02241 960 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PUM1Q14671 1186 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PDCD1Q15116 288 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PGS1Q32NB8 556 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 IZUMO3Q5VZ72 239 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 EEF1DP3Q658K8 133 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PGBD2Q6P3X8 592 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 NPNTQ6UXI9 565 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 CYP26C1Q6V0L0 522 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 C1orf122Q6ZSJ8 110 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 COLGALT2Q8IYK4 626 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PRR18Q8N4B5 295 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 KIAA1958Q8N8K9 716 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 LRTOMTQ8WZ04 291 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 PEX11GQ96HA9 241 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 TTC14Q96N46 770 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 B3GNT5Q9BYG0 378 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 CERS4Q9HA82 394 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 GPRC5CQ9NQ84 441 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 STARD7Q9NQZ5 370 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 GPRC5BQ9NZH0 403 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 NUDT5Q9UKK9 219 aa5.27□□□□□ -1.57
PTCD3-214ENST00000483925 TRBV23OR9-2A0A075B6M9 112 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 STXBP3O00186 592 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 NCAM2O15394 837 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 NDUFS2O75306 463 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 CYP17A1P05093 508 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 SLC9A1P19634 815 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 ABCB4P21439 1286 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 ENPP1P22413 925 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 TNFSF4P23510 183 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 SMARCA1P28370 1054 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 CNR2P34972 360 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 IL6STP40189 918 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 PIK3CBP42338 1070 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 MAGEA10P43363 369 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 MTNR1BP49286 362 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 SLC5A3P53794 718 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 SLC16A1P53985 500 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 IRF9Q00978 393 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 PRKG2Q13237 762 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 G3BP1Q13283 466 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 POLD3Q15054 466 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 FSCN1Q16658 493 aaKnown RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 RETSATQ6NUM9 610 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 C4orf50Q6ZRC1 276 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 PDZD4Q76G19 769 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 CNPY4Q8N129 248 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 LZTR1Q8N653 840 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 TGFBRAP1Q8WUH2 860 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 CPA5Q8WXQ8 436 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 USP13Q92995 863 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 PHKBQ93100 1093 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 SERINC2Q96SA4 455 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 ELF4Q99607 663 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 BTBD1Q9H0C5 482 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 BCAS3Q9H6U6 928 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 RXFP1Q9HBX9 757 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 DMRT3Q9NQL9 472 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 ACSS2Q9NR19 701 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
PTCD3-214ENST00000483925 TTLL3Q9Y4R7 772 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 AFG3L2Q9Y4W6 797 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 DUSP10Q9Y6W6 482 aa5.26□□□□□ -1.57
PTCD3-214ENST00000483925 A0A087WV62 115 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ADAMTS3O15072 1205 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 MYO1BO43795 1136 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ZBTB7AO95365 584 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ZBTB48P10074 688 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 PLS3P13797 630 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 RRM1P23921 792 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 HTR1BP28222 390 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 GRK3P35626 688 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 IL12RB1P42701 662 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 AGFG1P52594 562 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ALDH6A1Q02252 535 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 CNN3Q15417 329 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ANO4Q32M45 955 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 FAM209BQ5JX69 171 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 DAAM2Q86T65 1068 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 THEMISQ8N1K5 641 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 NETO2Q8NC67 525 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 SMARCC2Q8TAQ2 1214 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 NSUN6Q8TEA1 469 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 HDAC2Q92769 488 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 TBC1D20Q96BZ9 403 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 ZC3H10Q96K80 434 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 UBXN10Q96LJ8 280 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 SEC62Q99442 399 aaKnown RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 NTMQ9P121 344 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 TMEFF2Q9UIK5 374 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-214ENST00000483925 CDC23Q9UJX2 597 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms