RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 AMHR2Q16671 573 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 CDCA2Q69YH5 1023 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 SLC27A1Q6PCB7 646 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 CATSPER3Q86XQ3 398 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 GPR65Q8IYL9 337 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 EMILIN2Q9BXX0 1053 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 RAB34Q9BZG1 259 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 TRIM6Q9C030 488 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 C2orf40Q9H1Z8 148 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 PRMT7Q9NVM4 692 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 FAN1Q9Y2M0 1017 aa13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 MTCL1Q9Y4B5 1905 aaKnown RBP13.46□□□□□ -0.25
SQSTM1-207ENST00000481335 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 LAD1O00515 517 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 DDHD2O94830 711 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 C1RP00736 705 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 SOD2P04179 222 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 ARF4P18085 180 aaPredicted RBP13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.262e-7■■□□□ 14
SQSTM1-207ENST00000481335 FOSBP53539 338 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 DSC1Q08554 894 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 PPP2R5AQ15172 486 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 ZNF280BQ86YH2 543 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 PIGOQ8TEQ8 1089 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 DPP7Q9UHL4 492 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
SQSTM1-207ENST00000481335 NRP1O14786 923 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 MED24O75448 989 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 URODP06132 367 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 CA8P35219 290 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 ZXDAP98168 799 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 SIGLEC14Q08ET2 396 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 GRIK3Q13003 919 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 PDIA5Q14554 519 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 ELMSAN1Q6PJG2 1045 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 RNF168Q8IYW5 571 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 RPGRIP1Q96KN7 1286 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 KIF2CQ99661 725 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 HERC2P3Q9BVR0 1158 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 SFXN1Q9H9B4 322 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 MYO10Q9HD67 2058 aa13.44□□□□□ -0.26
SQSTM1-207ENST00000481335 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 PHLPP2Q6ZVD8 1323 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 LRRIQ4A6NIV6 560 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 N4BP3O15049 544 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 ST18O60284 1047 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 B4GALT3O60512 393 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 EFEMP2O95967 443 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 POMCP01189 267 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 CYP11B2P19099 503 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 MLH1P40692 756 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 NAMPTP43490 491 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 RABEP1Q15276 862 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 PTPN21Q16825 1174 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 ATAT1Q5SQI0 421 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 C15orf39Q6ZRI6 1047 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 HFE2Q6ZVN8 426 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 CPB2Q96IY4 423 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 GAD1Q99259 594 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 PRRX2Q99811 253 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 RHOBTB2Q9BYZ6 727 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 FZD8Q9H461 694 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 WDFY4Q6ZS81 3184 aa13.43□□□□□ -0.26
SQSTM1-207ENST00000481335 LILRB3O75022 631 aa13.42□□□□□ -0.26
SQSTM1-207ENST00000481335 ADH1AP07327 375 aa13.42□□□□□ -0.26
SQSTM1-207ENST00000481335 PRPHP41219 470 aa13.42□□□□□ -0.26
SQSTM1-207ENST00000481335 CLCN4P51793 760 aa13.42□□□□□ -0.26
SQSTM1-207ENST00000481335 AFF1P51825 1210 aaKnown RBP13.42□□□□□ -0.26
SQSTM1-207ENST00000481335 CREMQ03060 361 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms