RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TMEM161BQ8NDZ6 487 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
PTPRF-213ENST00000481019 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 FIZ1Q96SL8 496 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
PTPRF-213ENST00000481019 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 TCHHQ07283 1943 aa13.48□□□□□ -0.25
PTPRF-213ENST00000481019 ACKR2O00590 384 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 ITGB1P05556 798 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 MAPTP10636 758 aaKnown RBP13.47□□□□□ -0.25
PTPRF-213ENST00000481019 AKAP5P24588 427 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 RAB27AP51159 221 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 ZNF131P52739 623 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
PTPRF-213ENST00000481019 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■□□□□ 9
PTPRF-213ENST00000481019 MAPK6Q16659 721 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 DYMQ7RTS9 669 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 ZNF280BQ86YH2 543 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 SPIRE2Q8WWL2 714 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 STAMQ92783 540 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 NTPCRQ9BSD7 190 aaKnown RBP13.47□□□□□ -0.25
PTPRF-213ENST00000481019 APOL6Q9BWW8 343 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 KMT5AQ9NQR1 393 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 PCDHGC5Q9Y5F6 944 aa13.47□□□□□ -0.25
PTPRF-213ENST00000481019 VCANP13611 3396 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 ABLIM1O14639 778 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 DDHD2O94830 711 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 ME1P48163 572 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 NCKAP1LP55160 1127 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 DMP1Q13316 513 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 NOMO2Q5JPE7 1267 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 SPOUT1Q5T280 376 aaKnown RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 TMEM173Q86WV6 379 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 GSTCDQ8NEC7 633 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 SPPL3Q8TCT6 385 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 TIPINQ9BVW5 301 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 TARS2Q9BW92 718 aaKnown RBP13.46□□□□□ -0.25
PTPRF-213ENST00000481019 FGFBP2Q9BYJ0 223 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 HAPLN2Q9GZV7 340 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 KLK14Q9P0G3 267 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
PTPRF-213ENST00000481019 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 NT5C1B-RDH14C9J2C7 533 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 K7ERI5 159 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 MEFVO15553 781 aaPredicted RBP13.45□□□□□ -0.26
PTPRF-213ENST00000481019 HOXA2O43364 376 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 POMCP01189 267 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 RB1P06400 928 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 SKIP12755 728 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 ITGA4P13612 1032 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
PTPRF-213ENST00000481019 IRS1P35568 1242 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 MLH1P40692 756 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 STAT6P42226 847 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 EFNA5P52803 228 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 UBE2HP62256 183 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 ATF7IP2Q5U623 682 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 GLB1LQ6UWU2 654 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 MYCT1Q8N699 235 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 CEP120Q8N960 986 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 DDX12PQ92771 950 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 DHX58Q96C10 678 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 GAD1Q99259 594 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 TMEM134Q9H6X4 195 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 NRDE2Q9H7Z3 1164 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 RSAD1Q9HA92 442 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
PTPRF-213ENST00000481019 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 ODF2LQ9ULJ1 636 aa13.45□□□□□ -0.26
PTPRF-213ENST00000481019 ARL5CA6NH57 179 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 F8W810 466 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 N4BP3O15049 544 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 FGF18O76093 207 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms