RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 FILIP1Q7Z7B0 1213 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 POFUT1Q9H488 388 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 SEC61A2Q9H9S3 476 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 RREB1Q92766 1687 aa6.38□□□□□ -1.39
VPS50-214ENST00000477935 CDC42BPGQ6DT37 1551 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 NPEPPSL1A6NEC2 478 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 PRPF6O94906 941 aaKnown RBP6.37□□□□□ -1.39
VPS50-214ENST00000477935 MRE11P49959 708 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 MEOX1P50221 254 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 RAC3P60763 192 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 PHC1P78364 1004 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 DHCR24Q15392 516 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 GPR158Q5T848 1215 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 AGBL4Q5VU57 503 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 C11orf74Q86VG3 221 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 TCP11L2Q8N4U5 519 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 UBR7Q8N806 425 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 OR5AN1Q8NGI8 311 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 RPGRQ92834 1020 aaKnown RBP6.37□□□□□ -1.39
VPS50-214ENST00000477935 LMF1Q96S06 567 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 MYL10Q9BUA6 226 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 EMC7Q9NPA0 242 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 KCMF1Q9P0J7 381 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 MAGEL2Q9UJ55 1249 aa6.37□□□□□ -1.39
VPS50-214ENST00000477935 NUP188Q5SRE5 1749 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 THSD7AQ9UPZ6 1657 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 NAIPQ13075 1403 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 ATP10DQ9P241 1426 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 GPR42O15529 346 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 ARHGAP6O43182 974 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 APOL3O95236 402 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 BPIP17213 487 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 BCAR1P56945 870 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 ANTXR2P58335 489 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 EFEMP1Q12805 493 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 DGKDQ16760 1214 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 KIAA1841Q6NSI8 718 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 TIGD7Q6NT04 549 aaPredicted RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 USP30Q70CQ3 517 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 DDX46Q7L014 1031 aaKnown RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 KANSL1Q7Z3B3 1105 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 USP7Q93009 1102 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 NEIL1Q96FI4 390 aaPredicted RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 ZNF496Q96IT1 587 aaPredicted RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 LRRC37BQ96QE4 947 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 SEMA4AQ9H3S1 761 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 CAAP1Q9H8G2 361 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 USP36Q9P275 1121 aaKnown RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 SAE1Q9UBE0 346 aaPredicted RBP6.36□□□□□ -1.39
VPS50-214ENST00000477935 FAM184BQ9ULE4 1060 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 VWA7Q9Y334 891 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 NR2E1Q9Y466 385 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 PLCH1Q4KWH8 1693 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 IQGAP3Q86VI3 1631 aa6.36□□□□□ -1.39
VPS50-214ENST00000477935 DHX57Q6P158 1386 aaKnown RBP6.35□□□□□ -1.39
VPS50-214ENST00000477935 TOMM70O94826 608 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 SOX5P35711 763 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 BUD31P41223 144 aaPredicted RBP6.35□□□□□ -1.39
VPS50-214ENST00000477935 ADCY2Q08462 1091 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 STRN3Q13033 797 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 NFYCQ13952 458 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 TERF2Q15554 542 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 UNQ6494/PRO21346Q6UXR6 183 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 PRRT2Q7Z6L0 340 aaPredicted RBP6.35□□□□□ -1.39
VPS50-214ENST00000477935 CIR1Q86X95 450 aaPredicted RBP6.35□□□□□ -1.39
VPS50-214ENST00000477935 ZNF610Q8N9Z0 462 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 CHAC2Q8WUX2 184 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 OR10A2Q9H208 303 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 MSRAQ9UJ68 235 aa6.35□□□□□ -1.39
VPS50-214ENST00000477935 LCHNA4D1U4 455 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 ELL2O00472 640 aaPredicted RBP6.34□□□□□ -1.39
VPS50-214ENST00000477935 NEMP1O14524 444 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 LSP1P33241 339 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 ID4P47928 161 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 ADAM15Q13444 863 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 DDB1Q16531 1140 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 TXNRD1Q16881 649 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 BROXQ5VW32 411 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 KLHDC10Q6PID8 442 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 BMP8AQ7Z5Y6 402 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 STRA8Q7Z7C7 330 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 SLC5A5Q92911 643 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 LOXL4Q96JB6 756 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 TTC1Q99614 292 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 PITHD1Q9GZP4 211 aaPredicted RBP6.34□□□□□ -1.39
VPS50-214ENST00000477935 HAPLN2Q9GZV7 340 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 MS4A5Q9H3V2 200 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 MTG2Q9H4K7 406 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 POLR3BQ9NW08 1133 aaPredicted RBP6.34□□□□□ -1.39
VPS50-214ENST00000477935 SMPD4Q9NXE4 827 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 DENND2AQ9ULE3 1009 aa6.34□□□□□ -1.39
VPS50-214ENST00000477935 OAZ3Q9UMX2 235 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms