RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ACRP10323 421 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 SARSP49591 514 aaKnown RBP16.82■□□□□ 0.28
SEC13-215ENST00000477547 EPHB4P54760 987 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 STK4Q13043 487 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 GRIN2CQ14957 1233 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
SEC13-215ENST00000477547 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
SEC13-215ENST00000477547 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
SEC13-215ENST00000477547 RPUSD2Q8IZ73 545 aaKnown RBP16.82■□□□□ 0.28
SEC13-215ENST00000477547 PCDHB13Q9Y5F0 798 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 TTC3P53804 2025 aa16.82■□□□□ 0.28
SEC13-215ENST00000477547 ACKR2O00590 384 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 HNRNPDLO14979 420 aaKnown RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 PRPF6O94906 941 aaKnown RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 ARF4P18085 180 aaPredicted RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 TCTN1Q2MV58 587 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 ZNF658Q5TYW1 1059 aaPredicted RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 NOTUMQ6P988 496 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 EPM2AIP1Q7L775 607 aaPredicted RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 TRIML1Q8N9V2 468 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 CPB2Q96IY4 423 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 ACCSQ96QU6 501 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 STRA6Q9BX79 667 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 FTHL17Q9BXU8 183 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 ANKFY1Q9P2R3 1169 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 USP20Q9Y2K6 914 aa16.81■□□□□ 0.28
SEC13-215ENST00000477547 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
SEC13-215ENST00000477547 TTLL13PA6NNM8 815 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 MGEA5O60502 916 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 ACTN1P12814 892 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 AXLP30530 894 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 LIG4P49917 911 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 KCNA1Q09470 495 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 MORC3Q14149 939 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 BMT2Q1RMZ1 405 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 RBM43Q6ZSC3 357 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 NELFCDQ8IXH7 590 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 SCFD1Q8WVM8 642 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 LINC01599Q8WXQ3 324 aa16.8■□□□□ 0.28
SEC13-215ENST00000477547 RNPC3Q96LT9 517 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 TARS2Q9BW92 718 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 GTPBP4Q9BZE4 634 aaKnown RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
SEC13-215ENST00000477547 N4BP3O15049 544 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 PIGRP01833 764 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 ZSCAN20P17040 1043 aaPredicted RBP16.79■□□□□ 0.28
SEC13-215ENST00000477547 DSC3Q14574 896 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 ZNF568Q3ZCX4 644 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 CDR2LQ86X02 465 aaPredicted RBP16.79■□□□□ 0.28
SEC13-215ENST00000477547 SYCP3Q8IZU3 236 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 PDZD7Q9H5P4 517 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 TMEM206Q9H813 350 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 MAPK8IP1Q9UQF2 711 aa16.79■□□□□ 0.28
SEC13-215ENST00000477547 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 BAIAP3O94812 1187 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 KIF20AO95235 890 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 HOXA11P31270 313 aaPredicted RBP16.78■□□□□ 0.28
SEC13-215ENST00000477547 IKBKEQ14164 716 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 EEF1DP3Q658K8 133 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 SLC27A1Q6PCB7 646 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 ZNF507Q8TCN5 953 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 ACO2Q99798 780 aaKnown RBP16.78■□□□□ 0.28
SEC13-215ENST00000477547 ADAM2Q99965 735 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.78■□□□□ 0.281e-19■■□□□ 13.2
SEC13-215ENST00000477547 ADPGKQ9BRR6 497 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 CHST12Q9NRB3 414 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 TNFSF13BQ9Y275 285 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 KIAA1671Q9BY89 1806 aa16.78■□□□□ 0.28
SEC13-215ENST00000477547 ZBBXA8MT70 800 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 TISP43B9A030 160 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 EFCAB14O75071 495 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 TOM1L1O75674 476 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 NPTXRO95502 500 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 BMP6P22004 513 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 HOXD13P35453 343 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.28
SEC13-215ENST00000477547 STIM1Q13586 685 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.289e-6■□□□□ 8.9
SEC13-215ENST00000477547 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 MPZL3Q6UWV2 235 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 FAM43BQ6ZT52 329 aaPredicted RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 C16orf59Q7L2K0 433 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms