RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 WRAP73Q9P2S5 460 aaPredicted RBP15.63■□□□□ 0.09
CCDC78-209ENST00000474647 KCNJ14Q9UNX9 436 aa15.63■□□□□ 0.09
CCDC78-209ENST00000474647 CCDC195A0A1B0GUA6 201 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 INPPL1O15357 1258 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 TEX28O15482 410 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 MARCH6O60337 910 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 REC8O95072 547 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 GLUD1P00367 558 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 P4HBP07237 508 aaKnown RBP15.62■□□□□ 0.09
CCDC78-209ENST00000474647 NPR3P17342 541 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
CCDC78-209ENST00000474647 YWHABP31946 246 aaKnown RBP15.62■□□□□ 0.09
CCDC78-209ENST00000474647 MLH1P40692 756 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 GLUD2P49448 558 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 NPY5RQ15761 445 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 NCAPH2Q6IBW4 605 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 GALNT17Q6IS24 598 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 CPLX2Q6PUV4 134 aaKnown RBP15.62■□□□□ 0.09
CCDC78-209ENST00000474647 EXOC8Q8IYI6 725 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 CCDC105Q8IYK2 499 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 TCP11Q8WWU5 503 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 RPS6KC1Q96S38 1066 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 DHX33Q9H6R0 707 aaKnown RBP15.62■□□□□ 0.09
CCDC78-209ENST00000474647 IPPQ9Y573 584 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 CLUHO75153 1309 aa15.62■□□□□ 0.09
CCDC78-209ENST00000474647 CCNT1O60563 726 aaKnown RBP15.61■□□□□ 0.09
CCDC78-209ENST00000474647 LILRB3O75022 631 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 N4BP1O75113 896 aaKnown RBP15.61■□□□□ 0.09
CCDC78-209ENST00000474647 SPATA31D3P0C874 917 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 HOXA11P31270 313 aaPredicted RBP15.61■□□□□ 0.09
CCDC78-209ENST00000474647 SCNN1GP51170 649 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 ANGPT1Q15389 498 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 XKR9Q5GH70 373 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 SPATA31D4Q6ZUB0 917 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 TAS1R1Q7RTX1 841 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 NEK8Q86SG6 692 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 GLYCTKQ8IVS8 523 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 ADSSL1Q8N142 457 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 SMG8Q8ND04 991 aaKnown RBP15.61■□□□□ 0.09
CCDC78-209ENST00000474647 CNNM3Q8NE01 707 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 RSAD2Q8WXG1 361 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 STAMQ92783 540 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 CPB2Q96IY4 423 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 GAD1Q99259 594 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 MTRQ99707 1265 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 RTP3Q9BQQ7 232 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 EIF2AQ9BY44 585 aaKnown RBP15.61■□□□□ 0.09
CCDC78-209ENST00000474647 KCNMB3Q9NPA1 279 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 IGSF9Q9P2J2 1179 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 CA14Q9ULX7 337 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 HES2Q9Y543 173 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 CYP46A1Q9Y6A2 500 aa15.61■□□□□ 0.09
CCDC78-209ENST00000474647 ARL5CA6NH57 179 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 F8W810 466 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 GAS2O43903 313 aaKnown RBP15.6■□□□□ 0.09
CCDC78-209ENST00000474647 TSPAN1O60635 241 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 RFPL2O75678 378 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 CYP4A11Q02928 519 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 CTTNQ14247 550 aaKnown RBP15.6■□□□□ 0.09
CCDC78-209ENST00000474647 NOTUMQ6P988 496 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 PIK3AP1Q6ZUJ8 805 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 OTUD6AQ7L8S5 288 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 FERMT3Q86UX7 667 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 COLGALT2Q8IYK4 626 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 DTWD2Q8NBA8 298 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 CMASQ8NFW8 434 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-209ENST00000474647 SMG7Q92540 1137 aaKnown RBP15.6■□□□□ 0.09
CCDC78-209ENST00000474647 DYDC2Q96IM9 177 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 B3GALT6Q96L58 329 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 ZFP42Q96MM3 310 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 TRIM6Q9C030 488 aaPredicted RBP15.6■□□□□ 0.09
CCDC78-209ENST00000474647 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 UBN1Q9NPG3 1134 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 RGL1Q9NZL6 768 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 PPME1Q9Y570 386 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 GVINP1Q7Z2Y8 2422 aa15.6■□□□□ 0.09
CCDC78-209ENST00000474647 INO80B-WBP1J3KQ70 363 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 ZBTB39O15060 712 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 NR1I2O75469 434 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 EPHA7Q15375 998 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 GET4Q7L5D6 327 aaPredicted RBP15.59■□□□□ 0.09
CCDC78-209ENST00000474647 PALB2Q86YC2 1186 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 C4orf19Q8IY42 314 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 ZNF274Q96GC6 653 aaPredicted RBP15.59■□□□□ 0.09
CCDC78-209ENST00000474647 PHF20Q9BVI0 1012 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 ZSWIM6Q9HCJ5 1215 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 WDR6Q9NNW5 1121 aaKnown RBP15.59■□□□□ 0.09
CCDC78-209ENST00000474647 CACNA1IQ9P0X4 2223 aa15.59■□□□□ 0.09
CCDC78-209ENST00000474647 CITO14578 2027 aa15.58■□□□□ 0.09
CCDC78-209ENST00000474647 COL4A3Q01955 1670 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 ASAP2O43150 1006 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 DTNBO60941 627 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
CCDC78-209ENST00000474647 AXLP30530 894 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 FOXK2Q01167 660 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms