RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 UNCXA6NJT0 531 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 FOXN3O00409 490 aaPredicted RBP10.63□□□□□ -0.71
USP39-214ENST00000474572 PEX10O60683 326 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 ZC3H11AO75152 810 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP39-214ENST00000474572 LGR5O75473 907 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 KIF4AO95239 1232 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 GLRA2P23416 452 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 TNFRSF8P28908 595 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 EPHX2P34913 555 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 PAFAH1B1P43034 410 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 GCLMP48507 274 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 GALCP54803 685 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 SOX10P56693 466 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 GABPB1Q06547 395 aaPredicted RBP10.63□□□□□ -0.71
USP39-214ENST00000474572 C2orf54Q08AI8 447 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 ENOX2Q16206 610 aaKnown RBP10.63□□□□□ -0.71
USP39-214ENST00000474572 KCNV1Q6PIU1 500 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 FASTKD5Q7L8L6 764 aaKnown RBP10.63□□□□□ -0.71
USP39-214ENST00000474572 USP37Q86T82 979 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 SHCBP1Q8NEM2 672 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 CAGE1Q8TC20 777 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 ASAP3Q8TDY4 903 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
USP39-214ENST00000474572 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 RFFLQ8WZ73 363 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 SHC3Q92529 594 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 KREMEN1Q96MU8 473 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 ISCUQ9H1K1 167 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 KIAA1586Q9HCI6 787 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 RBPJLQ9UBG7 517 aa10.63□□□□□ -0.71
USP39-214ENST00000474572 ANKRD62A6NC57 917 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 GOLGA8IPA6NC78 632 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 GOLGA8JA6NMD2 632 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 EXTL3O43909 919 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 FTCDO95954 541 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 OSBPP22059 807 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 POLGP54098 1239 aaPredicted RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 FAM193AP78312 1265 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 SP4Q02446 784 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 PSMD6Q15008 389 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 ARHGAP44Q17R89 818 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 CFAP221Q4G0U5 840 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 FAM160B1Q5W0V3 765 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 SMYD5Q6GMV2 418 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 MOB2Q70IA6 237 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 GLYCTKQ8IVS8 523 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 FAM71AQ8IYT1 594 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 EPS8L1Q8TE68 723 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 SEMA4DQ92854 862 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 SAAL1Q96ER3 474 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 PBKQ96KB5 322 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 FAM167AQ96KS9 214 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 FAM81BQ96LP2 452 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 MPHOSPH6Q99547 160 aaKnown RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 AGPAT1Q99943 283 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 TXNRD2Q9NNW7 524 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 UBE2TQ9NPD8 197 aaPredicted RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 SUCLA2Q9P2R7 463 aaPredicted RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 TMEM59LQ9UK28 342 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 NOCTQ9UK39 431 aaKnown RBP10.62□□□□□ -0.71
USP39-214ENST00000474572 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
USP39-214ENST00000474572 ADGRA2Q96PE1 1338 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 GAS2O43903 313 aaKnown RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 LRRN2O75325 713 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 MAFO75444 373 aaPredicted RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 MTA2O94776 668 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 ARIH2O95376 493 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 GGPS1O95749 300 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 CXCR5P32302 372 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 GJA5P36382 358 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 MAP9Q49MG5 647 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 CCDC62Q6P9F0 684 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 ENOSF1Q7L5Y1 443 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 HDXQ7Z353 690 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 NT5DC3Q86UY8 548 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 SYCE1Q8N0S2 351 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 RASGEF1CQ8N431 466 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 ACTRT1Q8TDG2 376 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 LMBR1Q8WVP7 490 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
USP39-214ENST00000474572 KAT5Q92993 513 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
USP39-214ENST00000474572 PAGR1Q9BTK6 254 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms