RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SAPCD2Q86UD0 394 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 RNF149Q8NC42 400 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PARD3BQ8TEW8 1205 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PI4K2AQ9BTU6 479 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 C17orf75Q9HAS0 396 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 DIS3Q9Y2L1 958 aaKnown RBP6.77□□□□□ -1.33
CLK1-210ENST00000473565 SLC45A1Q9Y2W3 748 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 PTPRJQ12913 1337 aa6.77□□□□□ -1.33
CLK1-210ENST00000473565 GTPBP10A4D1E9 387 aaKnown RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 UNCXA6NJT0 531 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 TMCO5BA8MYB1 307 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 F8VZ95 297 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 DYNC1I1O14576 645 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 EVI5O60447 810 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 ATP1A1P05023 1023 aaKnown RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 CYP2C19P33261 490 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 USP8P40818 1118 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 RTP1P59025 263 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 LAMTOR4Q0VGL1 99 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 KIF5AQ12840 1032 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 KCNV1Q6PIU1 500 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 TAS1R2Q8TE23 839 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 UBE2TQ9NPD8 197 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 AIPL1Q9NZN9 384 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 APEX2Q9UBZ4 518 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 FOXN3O00409 490 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 B4GALT5O43286 388 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 INSRRP14616 1297 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 CYP2B6P20813 491 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 RFC5P40937 340 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 TNFSF9P41273 254 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 NAMPTP43490 491 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 CYP24A1Q07973 514 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 MAPK8IP2Q13387 824 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 MYBPC2Q14324 1141 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 EPC2Q52LR7 807 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 BRDTQ58F21 947 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 PALB2Q86YC2 1186 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 GPD1LQ8N335 351 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 GTF3C2Q8WUA4 911 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 PSMB7Q99436 277 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 SMARCAD1Q9H4L7 1026 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 MINDY3Q9H8M7 445 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 PDE11AQ9HCR9 933 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 SUCLA2Q9P2R7 463 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 AGO2Q9UKV8 859 aaKnown RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 MRFAP1Q9Y605 127 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 ZSWIM8A7E2V4 1837 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 SSU72P8A0A1W2PR75 194 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 CTAGE9A4FU28 777 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 NCK2O43639 380 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 KRT86O43790 486 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 STRNO43815 780 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 ADCY3O60266 1144 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 GH1P01241 217 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 DNA2P51530 1060 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 OSTNP61366 133 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 ACVR2BQ13705 512 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 RGMBQ6NW40 437 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 EFCAB12Q6NXP0 572 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 CRELD2Q6UXH1 353 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 PAXIP1Q6ZW49 1069 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 PLPPR4Q7Z2D5 763 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 PPM1KQ8N3J5 372 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 SLC17A8Q8NDX2 589 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 ZNF516Q92618 1163 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 SYN2Q92777 582 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 HVCN1Q96D96 273 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 FAM167AQ96KS9 214 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 NAPGQ99747 312 aaPredicted RBP6.76□□□□□ -1.33
CLK1-210ENST00000473565 MSTO1Q9BUK6 570 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 GOLPH3Q9H4A6 298 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 VTA1Q9NP79 307 aa6.76□□□□□ -1.33
CLK1-210ENST00000473565 LCA5LO95447 670 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 VTNP04004 478 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 IQCF3P0C7M6 154 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 KLRC1P26715 233 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 SOX5P35711 763 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 NAP1L1P55209 391 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 SLC18A3Q16572 532 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 SV2AQ7L0J3 742 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 GLYCTKQ8IVS8 523 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 CEP120Q8N960 986 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 MNS1Q8NEH6 495 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 OR6J1Q8NGC5 347 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 OLIG1Q8TAK6 271 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 LNX1Q8TBB1 728 aaPredicted RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 SLC20A1Q8WUM9 679 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 PSPC1Q8WXF1 523 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 SECISBP2LQ93073 1101 aaKnown RBP6.75□□□□□ -1.33
CLK1-210ENST00000473565 TATDN2Q93075 761 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 FAM212AQ96EL1 285 aa6.75□□□□□ -1.33
CLK1-210ENST00000473565 CAPZA3Q96KX2 299 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms