RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 VPS52Q8N1B4 723 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 SMG8Q8ND04 991 aaKnown RBP21.46■■□□□ 1.03
COMMD1-208ENST00000472729 CALML4Q96GE6 196 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 IGSF21Q96ID5 467 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 AK8Q96MA6 479 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 RPS6KC1Q96S38 1066 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 GAD1Q99259 594 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 TMEM175Q9BSA9 504 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 DAXXQ9UER7 740 aaPredicted RBP21.46■■□□□ 1.03
COMMD1-208ENST00000472729 HES2Q9Y543 173 aa21.46■■□□□ 1.03
COMMD1-208ENST00000472729 RALGAPA2Q2PPJ7 1873 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 XIRP2A4UGR9 3374 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 ARL5CA6NH57 179 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 K7ERI5 159 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 FSCN2O14926 492 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 HSP90AA1P07900 732 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 LTBRP36941 435 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 OR1G1P47890 313 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 SMAD4Q13485 552 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 IL17AQ16552 155 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 AMHR2Q16671 573 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 DUSP6Q16828 381 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 DDX53Q86TM3 631 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 CDR2LQ86X02 465 aaPredicted RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 ZNF280BQ86YH2 543 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 GJD3Q8N144 294 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 MRPL43Q8N983 215 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 POP1Q99575 1024 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 TIPINQ9BVW5 301 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 FZD8Q9H461 694 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 NXF3Q9H4D5 531 aaKnown RBP21.45■■□□□ 1.02
COMMD1-208ENST00000472729 PHLPP2Q6ZVD8 1323 aa21.45■■□□□ 1.02
COMMD1-208ENST00000472729 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.44■■□□□ 1.02
COMMD1-208ENST00000472729 ACKR2O00590 384 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 SLC11A1P49279 550 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 DLX2Q07687 328 aaPredicted RBP21.44■■□□□ 1.02
COMMD1-208ENST00000472729 FAM187BQ17R55 369 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 LLGL2Q6P1M3 1020 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 CABP7Q86V35 215 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 FAM178BQ8IXR5 827 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
COMMD1-208ENST00000472729 PLIN2Q99541 437 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 RNF39Q9H2S5 420 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 POLD4Q9HCU8 107 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 DNAJB4Q9UDY4 337 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 PRKAG3Q9UGI9 489 aa21.44■■□□□ 1.02
COMMD1-208ENST00000472729 BARX2Q9UMQ3 279 aaPredicted RBP21.44■■□□□ 1.02
COMMD1-208ENST00000472729 HIDE1A8MVS5 230 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 K7ELQ4 463 aaPredicted RBP21.43■■□□□ 1.02
COMMD1-208ENST00000472729 TBX10O75333 385 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 AKAP5P24588 427 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 PEX3P56589 373 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 BSNDQ8WZ55 320 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 C17orf75Q9HAS0 396 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 RBM19Q9Y4C8 960 aaKnown RBP21.43■■□□□ 1.02
COMMD1-208ENST00000472729 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 LOXHD1Q8IVV2 1947 aa21.43■■□□□ 1.02
COMMD1-208ENST00000472729 SPDYE4A6NLX3 237 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 MBTPS2O43462 519 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SLC26A4O43511 780 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 HIP1RO75146 1068 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 DDHD2O94830 711 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SCNN1GP51170 649 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SMTNP53814 917 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 COASYQ13057 564 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SF3A1Q15459 793 aaKnown RBP21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SMAD2Q15796 467 aaKnown RBP21.42■■□□□ 1.02
COMMD1-208ENST00000472729 CASP10Q92851 521 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 KIFC3Q9BVG8 833 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 COLEC11Q9BWP8 271 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 C1QTNF1Q9BXJ1 281 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 EMILIN2Q9BXX0 1053 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 KMT5AQ9NQR1 393 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 SSX2IPQ9Y2D8 614 aa21.42■■□□□ 1.02
COMMD1-208ENST00000472729 PRG3Q9Y2Y8 225 aaPredicted RBP21.42■■□□□ 1.02
COMMD1-208ENST00000472729 TTC28Q96AY4 2481 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 C2orf71A6NGG8 1288 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 NRP1O14786 923 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 LONP1P36776 959 aaKnown RBP21.41■■□□□ 1.02
COMMD1-208ENST00000472729 AFF1P51825 1210 aaKnown RBP21.41■■□□□ 1.02
COMMD1-208ENST00000472729 STRN3Q13033 797 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 DCAF4L1Q3SXM0 396 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 ATF7IP2Q5U623 682 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 KIAA1841Q6NSI8 718 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 RINT1Q6NUQ1 792 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 ADHFE1Q8IWW8 467 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 ZFP42Q96MM3 310 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 TCHPQ9BT92 498 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 MMTAG2Q9BU76 263 aaKnown RBP21.41■■□□□ 1.02
COMMD1-208ENST00000472729 PDZD7Q9H5P4 517 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 KCND2Q9NZV8 630 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 KLK14Q9P0G3 267 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 CLEC1BQ9P126 229 aa21.41■■□□□ 1.02
COMMD1-208ENST00000472729 KRT18P05783 430 aaKnown RBP21.4■■□□□ 1.02
COMMD1-208ENST00000472729 PLA2G4BP0C869 781 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 CTSAP10619 480 aa21.4■■□□□ 1.02
COMMD1-208ENST00000472729 HOXB8P17481 243 aaPredicted RBP21.4■■□□□ 1.02
COMMD1-208ENST00000472729 SYT1P21579 422 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms