RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PGBD4Q96DM1 585 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF512Q96ME7 567 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 GPR87Q9BY21 358 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF703Q9H7S9 590 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ADARB2Q9NS39 739 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 PARPBPQ9NWS1 579 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ING3Q9NXR8 418 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 USP35Q9P2H5 1018 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 USP18Q9UMW8 372 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 MAPRE3Q9UPY8 281 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 APOBEC2Q9Y235 224 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 A0A1W2PR48 441 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 NEMP1O14524 444 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 PRAMEF4O60810 478 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 FAM20BO75063 409 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 RAB11FIP3O75154 756 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 TMEM127O75204 238 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF37AP17032 561 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 GNAT2P19087 354 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 XPAP23025 273 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 CASRP41180 1078 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ID4P47928 161 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 GYS2P54840 703 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 WNT3AP56704 352 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 NRG3P56975 720 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 SLC25A3Q00325 362 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 DUSP2Q05923 314 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 TOB2Q14106 344 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 DHCR24Q15392 516 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ATP13A4Q4VNC1 1196 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 CCDC178Q5BJE1 867 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 DCAF17Q5H9S7 520 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 PITRM1Q5JRX3 1037 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 Q6ZPA2 131 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF662Q6ZS27 426 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 FRMD7Q6ZUT3 714 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 HDGFL2Q7Z4V5 671 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 APBB1IPQ7Z5R6 666 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 LYSMD2Q8IV50 215 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 SLC41A1Q8IVJ1 513 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 CLRN3Q8NCR9 226 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ST8SIA2Q92186 375 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 USP7Q93009 1102 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ANO3Q9BYT9 981 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 CPEB1Q9BZB8 566 aaKnown RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 ENKD1Q9H0I2 346 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 WNT8AQ9H1J5 351 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 KCTD10Q9H3F6 313 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 PRDM12Q9H4Q4 367 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 IFT22Q9H7X7 185 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 MMRN2Q9H8L6 949 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 PTGFRNQ9P2B2 879 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 EVLQ9UI08 416 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 TMPRSS11EQ9UL52 423 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 REXO2Q9Y3B8 237 aaKnown RBP2.07□□□□□ -2.08
UBXN4-207ENST00000471246 CDY2AQ9Y6F7 541 aa2.07□□□□□ -2.08
UBXN4-207ENST00000471246 GRXCR1A8MXD5 290 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GOLGA6L6A8MZA4 724 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 RAMP2O60895 175 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 MFAP3LO75121 409 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 RPS6KA4O75676 772 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 PEX11BO96011 259 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 LPLP06858 475 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 LTA4HP09960 611 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GYPEP15421 78 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 HK1P19367 917 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 MAKP20794 623 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 SOX5P35711 763 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GZMKP49863 264 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 LGALS4P56470 323 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 SESN3P58005 492 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 MEF2AQ02078 507 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 STRN3Q13033 797 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 PDCD1Q15116 288 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 CT83Q5H943 113 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 RABL3Q5HYI8 236 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 NAIF1Q69YI7 327 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GIMAP6Q6P9H5 292 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 MICALCLQ6ZW33 695 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 TAS1R1Q7RTX1 841 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 RASSF3Q86WH2 238 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GSPT2Q8IYD1 628 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 UBR7Q8N806 425 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 OR5M3Q8NGP4 307 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 OR14C36Q8NHC7 312 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 CLIP3Q96DZ5 547 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 IL17RAQ96F46 866 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 MNTQ99583 582 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 TTC1Q99614 292 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 LSM14BQ9BX40 385 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 EPC1Q9H2F5 836 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 SLKQ9H2G2 1235 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 SLC2A4RGQ9NR83 387 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 TOPORSQ9NS56 1045 aaPredicted RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 GPRC5BQ9NZH0 403 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 PRSS50Q9UI38 385 aa2.06□□□□□ -2.08
UBXN4-207ENST00000471246 TMA7Q9Y2S6 64 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 NOC2LQ9Y3T9 749 aaKnown RBP2.06□□□□□ -2.08
UBXN4-207ENST00000471246 NUMBLQ9Y6R0 609 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms