RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 FZD8Q9H461 694 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 KMT5AQ9NQR1 393 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 PRMT7Q9NVM4 692 aaPredicted RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 CLDND1Q9NY35 253 aa11.24□□□□□ -0.61
CD40-204ENST00000466205 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 PRRC2BQ5JSZ5 2229 aaKnown RBP11.24□□□□□ -0.61
CD40-204ENST00000466205 SLC16A4O15374 487 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SCNN1GP51170 649 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 RBM10P98175 930 aaKnown RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 MAPK7Q13164 816 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 DMP1Q13316 513 aaPredicted RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 STK38Q15208 465 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 FAM43BQ6ZT52 329 aaPredicted RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 MRPL10Q7Z7H8 261 aaKnown RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 GPBP1Q86WP2 473 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SLC39A11Q8N1S5 342 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 ATXN2LQ8WWM7 1075 aaKnown RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 MRPS27Q92552 414 aaKnown RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 RABGGTAQ92696 567 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SYMPKQ92797 1274 aaKnown RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 TCF25Q9BQ70 676 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
CD40-204ENST00000466205 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 MIOSQ9NXC5 875 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SNTG2Q9NY99 539 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 CACNG4Q9UBN1 327 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 CNTNAP2Q9UHC6 1331 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
CD40-204ENST00000466205 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 A0A1B0GUA9 196 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 K7ERI5 159 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 ACKR2O00590 384 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 F13A1P00488 732 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 HARSP12081 509 aaKnown RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 OR1G1P47890 313 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 NRIP1P48552 1158 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 SLC11A1P49279 550 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 OSTNP61366 133 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 DLX2Q07687 328 aaPredicted RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 PCBP1Q15365 356 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD40-204ENST00000466205 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 NT5DC1Q5TFE4 455 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 ATF7IP2Q5U623 682 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 CNNM3Q8NE01 707 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 AUTS2Q8WXX7 1259 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 RAD54LQ92698 747 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 CCDC51Q96ER9 411 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 CXCL16Q9H2A7 254 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 BLOC1S4Q9NUP1 217 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 SPG21Q9NZD8 308 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 COG5Q9UP83 839 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 GDAQ9Y2T3 454 aa11.22□□□□□ -0.61
CD40-204ENST00000466205 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
CD40-204ENST00000466205 PHLPP2Q6ZVD8 1323 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 ARL5CA6NH57 179 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 HIDE1A8MVS5 230 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 F8W810 466 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 N4BP3O15049 544 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 GALTP07902 379 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
CD40-204ENST00000466205 PLS3P13797 630 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 IL9P15248 144 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 GUCY2CP25092 1073 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 KRT17Q04695 432 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 FAM187BQ17R55 369 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 TMC7Q7Z402 723 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 HACE1Q8IYU2 909 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 PDILTQ8N807 584 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 CEP120Q8N960 986 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 TMEM169Q96HH4 297 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 PRIMPOLQ96LW4 560 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 ADPGKQ9BRR6 497 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
CD40-204ENST00000466205 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
CD40-204ENST00000466205 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
CD40-204ENST00000466205 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.62
CD40-204ENST00000466205 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms