RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PRKCQQ04759 706 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 CSRP2Q16527 193 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 PRR16Q569H4 304 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 PRR23BQ6ZRT6 265 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 CCDC12Q8WUD4 166 aaPredicted RBP10.97□□□□□ -0.65
USP39-212ENST00000465514 FGF14Q92915 247 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 KCNB2Q92953 911 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 BRF1Q92994 677 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 ZNF707Q96C28 371 aaPredicted RBP10.97□□□□□ -0.65
USP39-212ENST00000465514 RHOBTB2Q9BYZ6 727 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 OSBPL6Q9BZF3 934 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP39-212ENST00000465514 GABBR1Q9UBS5 961 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
USP39-212ENST00000465514 A0A0U1RQF3 1178 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 GALTP07902 379 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 TARSP26639 723 aaKnown RBP10.96□□□□□ -0.65
USP39-212ENST00000465514 GNA11P29992 359 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 SETQ01105 290 aaPredicted RBP10.96□□□□□ -0.65
USP39-212ENST00000465514 SLC44A4Q53GD3 710 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 ZBTB41Q5SVQ8 909 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 CYP26C1Q6V0L0 522 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 SMAP1Q8IYB5 467 aaPredicted RBP10.96□□□□□ -0.65
USP39-212ENST00000465514 PHKBQ93100 1093 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
USP39-212ENST00000465514 FAM126AQ9BYI3 521 aaPredicted RBP10.96□□□□□ -0.65
USP39-212ENST00000465514 GBP3Q9H0R5 595 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 NRDE2Q9H7Z3 1164 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 DNAJB4Q9UDY4 337 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
USP39-212ENST00000465514 F5P12259 2224 aa10.96□□□□□ -0.66
USP39-212ENST00000465514 IGSF10Q6WRI0 2623 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 NID2Q14112 1375 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 C2CD2LO14523 706 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 MAGEB2O15479 319 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 B4GALT3O60512 393 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 LILRB3O75022 631 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 TDGF1P13385 188 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CIITAP33076 1130 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 SLC11A1P49279 550 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CLCN3P51790 818 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
USP39-212ENST00000465514 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
USP39-212ENST00000465514 MTAPQ13126 283 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 LONRF3Q496Y0 759 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 EFCAB12Q6NXP0 572 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 BLOC1S2Q6QNY1 142 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CELF5Q8N6W0 485 aaKnown RBP10.95□□□□□ -0.66
USP39-212ENST00000465514 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
USP39-212ENST00000465514 BICD2Q8TD16 824 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CLDN23Q96B33 292 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 LENG9Q96B70 501 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 PIDD1Q9HB75 910 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 MRPL17Q9NRX2 175 aaKnown RBP10.95□□□□□ -0.66
USP39-212ENST00000465514 TBC1D13Q9NVG8 400 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CEP131Q9UPN4 1083 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 AKT3Q9Y243 479 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 INPP5FQ9Y2H2 1132 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 LAMA5O15230 3695 aa10.95□□□□□ -0.66
USP39-212ENST00000465514 CARNS1A5YM72 827 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 MSH4O15457 936 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 EDIL3O43854 480 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ZNF862O60290 1169 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 GLUD1P00367 558 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ADH1AP07327 375 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 SPATA31D3P0C874 917 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 FGFR4P22455 802 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 RPS6KB1P23443 525 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 HSPA4P34932 840 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 RPS9P46781 194 aaKnown RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 AK2P54819 239 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 RNASELQ05823 741 aaKnown RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 RING1Q06587 406 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 NTRK3Q16288 839 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ELMSAN1Q6PJG2 1045 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 LRSAM1Q6UWE0 723 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 RSPO2Q6UXX9 243 aaPredicted RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 SPATA31D4Q6ZUB0 917 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 TPRG1Q6ZUI0 275 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 LRRC71Q8N4P6 559 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 LINC01465Q8N7H1 131 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 LPPQ93052 612 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 CCDC136Q96JN2 1154 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
USP39-212ENST00000465514 FAM167AQ96KS9 214 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 SLC26A6Q9BXS9 759 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 ADAMTS10Q9H324 1103 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 DISC1Q9NRI5 854 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms