RNA–Protein interactions for RNA: ENST00000464163.1

FGFR1-215, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-215ENST00000464163 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
FGFR1-215ENST00000464163 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
FGFR1-215ENST00000464163 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
FGFR1-215ENST00000464163 TNFSF13BQ9Y275 285 aa12.4□□□□□ -0.42
FGFR1-215ENST00000464163 STYXL1Q9Y6J8 313 aa12.4□□□□□ -0.42
FGFR1-215ENST00000464163 AXLP30530 894 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 NLRP12P59046 1061 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 STRN3Q13033 797 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 PPIGQ13427 754 aaKnown RBP eCLIP12.39□□□□□ -0.432e-14■■■□□ 18.8
FGFR1-215ENST00000464163 KNOP1Q1ED39 458 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 ATF7IP2Q5U623 682 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.433e-8■□□□□ 8.8
FGFR1-215ENST00000464163 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 RPUSD2Q8IZ73 545 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 ZSWIM2Q8NEG5 633 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 CCDC47Q96A33 483 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 ADAM2Q99965 735 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 EIF2AQ9BY44 585 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 MRPL4Q9BYD3 311 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 RGS18Q9NS28 235 aa12.39□□□□□ -0.43
FGFR1-215ENST00000464163 PIN4Q9Y237 131 aaKnown RBP12.39□□□□□ -0.43
FGFR1-215ENST00000464163 C9IYK1 514 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 FAM189A1O60320 539 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 ERLIN2O94905 339 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 ABCD1P33897 745 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
FGFR1-215ENST00000464163 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 SMG8Q8ND04 991 aaKnown RBP12.38□□□□□ -0.43
FGFR1-215ENST00000464163 APBB2Q92870 758 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
FGFR1-215ENST00000464163 TMEM206Q9H813 350 aa12.38□□□□□ -0.43
FGFR1-215ENST00000464163 UBE4BO95155 1302 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 A0A0B4J269 797 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 ABHD14A-ACY1A0A1B0GW23 586 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 TOM1L1O75674 476 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 FGBP02675 491 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 PFKMP08237 780 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 ATF7P17544 494 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 MCL1Q07820 350 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 IKBKEQ14164 716 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 ZSCAN23Q3MJ62 389 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 ANKRD40Q6AI12 368 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 NOTUMQ6P988 496 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 FAM43BQ6ZT52 329 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 MRPL10Q7Z7H8 261 aaKnown RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 TMEM192Q8IY95 271 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 FTHL17Q9BXU8 183 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 CDT1Q9H211 546 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
FGFR1-215ENST00000464163 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
FGFR1-215ENST00000464163 SYCE3A1L190 88 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 PDXKO00764 312 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 HNRNPDLO14979 420 aaKnown RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 N4BP3O15049 544 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CLIC2O15247 247 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 ZNF623O75123 536 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 NPTXRO95502 500 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 LIG4P49917 911 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 NCBP1Q09161 790 aaKnown RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 MPZL3Q6UWV2 235 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 ECHDC2Q86YB7 292 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 SYCP3Q8IZU3 236 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CEP120Q8N960 986 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 MLKLQ8NB16 471 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 HERVK_113Q902F9 699 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CCDC51Q96ER9 411 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 DHTKD1Q96HY7 919 aaPredicted RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
FGFR1-215ENST00000464163 CXCL16Q9H2A7 254 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms