RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 DBR1Q9UK59 544 aaKnown RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
NUP50-213ENST00000461437 MYO10Q9HD67 2058 aa17.2■□□□□ 0.34
NUP50-213ENST00000461437 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
NUP50-213ENST00000461437 ARHGEF35A5YM69 484 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 WEE2P0C1S8 567 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
NUP50-213ENST00000461437 SCNN1GP51170 649 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 TMEM31Q5JXX7 168 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 PDE12Q6L8Q7 609 aaKnown RBP17.19■□□□□ 0.34
NUP50-213ENST00000461437 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 MRPL43Q8N983 215 aaKnown RBP17.19■□□□□ 0.34
NUP50-213ENST00000461437 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 RABGGTAQ92696 567 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 CDCA3Q99618 268 aaPredicted RBP17.19■□□□□ 0.34
NUP50-213ENST00000461437 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 PRKAG3Q9UGI9 489 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 KIAA1024Q9UPX6 916 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
NUP50-213ENST00000461437 ARL5CA6NH57 179 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 E9PMD0 336 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 NRP1O14786 923 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 EPCAMP16422 314 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 TRAPPC10P48553 1259 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
NUP50-213ENST00000461437 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
NUP50-213ENST00000461437 C12orf76Q8N812 135 aaPredicted RBP17.18■□□□□ 0.34
NUP50-213ENST00000461437 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 FAM193BQ96PV7 902 aaPredicted RBP17.18■□□□□ 0.34
NUP50-213ENST00000461437 TRIM6Q9C030 488 aaPredicted RBP17.18■□□□□ 0.34
NUP50-213ENST00000461437 S1PR5Q9H228 398 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
NUP50-213ENST00000461437 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 CNTNAP2Q9UHC6 1331 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 TECTAO75443 2155 aa17.18■□□□□ 0.34
NUP50-213ENST00000461437 CYP11B2P19099 503 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 AXLP30530 894 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 OR1G1P47890 313 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 KCNK18Q7Z418 384 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 DDX53Q86TM3 631 aaKnown RBP17.17■□□□□ 0.34
NUP50-213ENST00000461437 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 COLGALT2Q8IYK4 626 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.17■□□□□ 0.34
NUP50-213ENST00000461437 PARP2Q9UGN5 583 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
NUP50-213ENST00000461437 C2CD2LO14523 706 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 DCXO43602 365 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 MYBP10242 640 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 CTSAP10619 480 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 ZRSR1Q15695 479 aaKnown RBP17.16■□□□□ 0.34
NUP50-213ENST00000461437 EEF1DP3Q658K8 133 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 CDCA2Q69YH5 1023 aaPredicted RBP17.16■□□□□ 0.34
NUP50-213ENST00000461437 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 SUSD6Q92537 303 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 PLIN2Q99541 437 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 NFKBIZQ9BYH8 718 aa17.16■□□□□ 0.34
NUP50-213ENST00000461437 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
NUP50-213ENST00000461437 A0A1B0GUA9 196 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 PRKCBP05771 671 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
NUP50-213ENST00000461437 NCBP1Q09161 790 aaKnown RBP17.15■□□□□ 0.34
NUP50-213ENST00000461437 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 SLC27A1Q6PCB7 646 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 TMEM184AQ6ZMB5 413 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 CNNM3Q8NE01 707 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 GSTCDQ8NEC7 633 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 B3GALT6Q96L58 329 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 POP1Q99575 1024 aaKnown RBP17.15■□□□□ 0.34
NUP50-213ENST00000461437 MMTAG2Q9BU76 263 aaKnown RBP17.15■□□□□ 0.34
NUP50-213ENST00000461437 FZD8Q9H461 694 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 PDZD7Q9H5P4 517 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 DENND4AQ7Z401 1863 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
NUP50-213ENST00000461437 MTCL1Q9Y4B5 1905 aaKnown RBP17.15■□□□□ 0.34
NUP50-213ENST00000461437 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.34
NUP50-213ENST00000461437 TRIOO75962 3097 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 LOC730098B7Z3J9 87 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 H3BQV1 296 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 GPR37L1O60883 481 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 ALDH2P05091 517 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 SRGAP2BP0DMP2 458 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 CBX2Q14781 532 aaPredicted RBP17.14■□□□□ 0.33
NUP50-213ENST00000461437 RARS2Q5T160 578 aaKnown RBP17.14■□□□□ 0.33
NUP50-213ENST00000461437 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 CASP10Q92851 521 aa17.14■□□□□ 0.33
NUP50-213ENST00000461437 PAAF1Q9BRP4 392 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms