RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 DEUP1Q05D60 604 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 TRIM14Q14142 442 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 CNGA4Q8IV77 575 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 ZC3H3Q8IXZ2 948 aaKnown RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 C17orf53Q8N3J3 647 aaPredicted RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 TC2NQ8N9U0 490 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 HHIPL1Q96JK4 782 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 IFT74Q96LB3 600 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 STRA6Q9BX79 667 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 NIFKQ9BYG3 293 aaKnown RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 XPNPEP1Q9NQW7 623 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 PSD3Q9NYI0 1048 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 ZNF236Q9UL36 1845 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 GH1P01241 217 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 EPB41P11171 864 aaKnown RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 PYGBP11216 843 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 TRIM21P19474 475 aaKnown RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 NCKAP1LP55160 1127 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 MARSP56192 900 aaKnown RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 MORN1Q5T089 497 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 CYP4F22Q6NT55 531 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 BHMTQ93088 406 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 METTL14Q9HCE5 456 aaKnown RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 PDLIM7Q9NR12 457 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 ARMCX3Q9UH62 379 aaPredicted RBP11.26□□□□□ -0.61
HERC4-207ENST00000460168 EMSYQ7Z589 1322 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
HERC4-207ENST00000460168 EME2A4GXA9 379 aaPredicted RBP11.25□□□□□ -0.61
HERC4-207ENST00000460168 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
HERC4-207ENST00000460168 MFAP3LO75121 409 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 LGR5O75473 907 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 AKAP3O75969 853 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 BDNFP23560 247 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 RTP1P59025 263 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 GTF2BQ00403 316 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ARHGAP1Q07960 439 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ACVR2BQ13705 512 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ARMC3Q5W041 872 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 PLPPR4Q7Z2D5 763 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SPATA21Q7Z572 469 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 KATNBL1Q9H079 304 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ST6GALNAC4Q9H4F1 302 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SMARCAD1Q9H4L7 1026 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ST7Q9NRC1 585 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 AGPAT3Q9NRZ7 376 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SPATA7Q9P0W8 599 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 MCM8Q9UJA3 840 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.25□□□□□ -0.61
HERC4-207ENST00000460168 DENND3A2RUS2 1198 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SLC16A3O15427 465 aaKnown RBP11.25□□□□□ -0.61
HERC4-207ENST00000460168 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
HERC4-207ENST00000460168 RFC5P40937 340 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TM4SF4P48230 202 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SLC26A2P50443 739 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
HERC4-207ENST00000460168 CYP2J2P51589 502 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 DBN1Q16643 649 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 NFIL3Q16649 462 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 FRMD5Q7Z6J6 570 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TRIM59Q8IWR1 403 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TTC30BQ8N4P2 665 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TMEM161BQ8NDZ6 487 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ATP8B4Q8TF62 1192 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 SPIRE2Q8WWL2 714 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TMEM143Q96AN5 459 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 DHRS1Q96LJ7 313 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 CENPFP49454 3210 aa11.25□□□□□ -0.61
HERC4-207ENST00000460168 CA12O43570 354 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 CYP2B6P20813 491 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 CASP4P49662 377 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 MNAT1P51948 309 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 ARL10Q8N8L6 244 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 PPTC7Q8NI37 304 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 HDAC7Q8WUI4 952 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 AFG1LQ8WV93 481 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 NTPCRQ9BSD7 190 aaKnown RBP11.24□□□□□ -0.61
HERC4-207ENST00000460168 NACA2Q9H009 215 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
HERC4-207ENST00000460168 FAM184BQ9ULE4 1060 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms