RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 RDM1Q8NG50 284 aa21.67■■□□□ 1.06
CSPG5-203ENST00000456150 TMEM117Q9H0C3 514 aa21.67■■□□□ 1.06
CSPG5-203ENST00000456150 TMBIM4Q9HC24 238 aa21.67■■□□□ 1.06
CSPG5-203ENST00000456150 FEZ2Q9UHY8 353 aaPredicted RBP21.67■■□□□ 1.06
CSPG5-203ENST00000456150 SYNGAP1Q96PV0 1343 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 MYZAPP0CAP1 466 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 FDX1P10109 184 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 FAM102BQ5T8I3 360 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 UBL4BQ8N7F7 174 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 RMDN3Q96TC7 470 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 PDCD2LQ9BRP1 358 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 NEUROG2Q9H2A3 272 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 PXMP2Q9NR77 195 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
CSPG5-203ENST00000456150 HSPA6P17066 643 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 CTNNA1P35221 906 aaKnown RBP21.65■■□□□ 1.06
CSPG5-203ENST00000456150 RNF207Q6ZRF8 634 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 TRPM4Q8TD43 1214 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 PLEKHO2Q8TD55 490 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 RASSF4Q9H2L5 321 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 HACL1Q9UJ83 578 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 ALG6Q9Y672 507 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 EBAG9O00559 213 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 CTNND1O60716 968 aaKnown RBP21.65■■□□□ 1.06
CSPG5-203ENST00000456150 GZMAP12544 262 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 MFAP3P55082 362 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 PDCLQ13371 301 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 UAP1Q16222 522 aaPredicted RBP21.65■■□□□ 1.06
CSPG5-203ENST00000456150 XRRA1Q6P2D8 792 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 RUFY4Q6ZNE9 571 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 FAM71AQ8IYT1 594 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 GPC2Q8N158 579 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 MORC4Q8TE76 937 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 GPRC5CQ9NQ84 441 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 TBX20Q9UMR3 447 aa21.65■■□□□ 1.06
CSPG5-203ENST00000456150 FAM187AA6NFU0 413 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ADRB2P07550 413 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 USP8P40818 1118 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 CCT5P48643 541 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ATP1A2P50993 1020 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 DMP1Q13316 513 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 DHX34Q14147 1143 aaKnown RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 SNRNP35Q16560 246 aaKnown RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ARHGEF16Q5VV41 709 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 MAP4K3Q8IVH8 894 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 C10orf67Q8IYJ2 551 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ARFGAP2Q8N6H7 521 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 PROCA1Q8NCQ7 364 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 RPS6KC1Q96S38 1066 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 SH2D3AQ9BRG2 576 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 CELF4Q9BZC1 486 aaKnown RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 GPRC5DQ9NZD1 345 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 TMEM150BA6NC51 233 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 CCDC169A6NNP5 214 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 H0YGN5 161 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ZEB2O60315 1214 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 VCAM1P19320 739 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 DR1Q01658 176 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 SPDYCQ5MJ68 293 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 KRT39Q6A163 491 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 TTC19Q6DKK2 380 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 ZSWIM2Q8NEG5 633 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 EPS8L1Q8TE68 723 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 UBLCP1Q8WVY7 318 aaPredicted RBP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 TEPSINQ96N21 525 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.64■■□□□ 1.05
CSPG5-203ENST00000456150 NFS1Q9Y697 457 aa21.64■■□□□ 1.05
CSPG5-203ENST00000456150 WDR81Q562E7 1941 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 TESPA1A2RU30 521 aaPredicted RBP21.63■■□□□ 1.05
CSPG5-203ENST00000456150 ATP9AO75110 1047 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 MTA2O94776 668 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 ERLIN2O94905 339 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 CCNE2O96020 404 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 CORO7P57737 925 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 BIRC3Q13489 604 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 NAA35Q5VZE5 725 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 PLA2G4FQ68DD2 849 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 ZNF746Q6NUN9 644 aaPredicted RBP21.63■■□□□ 1.05
CSPG5-203ENST00000456150 TMC3Q7Z5M5 1100 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 USP37Q86T82 979 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 PPM1KQ8N3J5 372 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 TMEM161BQ8NDZ6 487 aa21.63■■□□□ 1.05
CSPG5-203ENST00000456150 NOCTQ9UK39 431 aaKnown RBP21.63■■□□□ 1.05
CSPG5-203ENST00000456150 GOLGA8IPA6NC78 632 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 GOLGA8JA6NMD2 632 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 SGPL1O95470 568 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 MAP2K1Q02750 393 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-203ENST00000456150 PARP14Q460N5 1801 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 NSMFQ6X4W1 530 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 OTUD6AQ7L8S5 288 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 CBWD2Q8IUF1 395 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 SHC3Q92529 594 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 ALG3Q92685 438 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 KIFAP3Q92845 792 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 DPH5Q9H2P9 285 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 RPAP3Q9H6T3 665 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-203ENST00000456150 C17orf75Q9HAS0 396 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 TMEM8AQ9HCN3 771 aa21.62■■□□□ 1.05
CSPG5-203ENST00000456150 RASAL2Q9UJF2 1139 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms