RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LVRNQ6Q4G3 990 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SETD9Q8NE22 299 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ACAP3Q96P50 834 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PRPF18Q99633 342 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 OSBPL8Q9BZF1 889 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 RPRD1BQ9NQG5 326 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DYNC1LI2O43237 492 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 E2F6O75461 281 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SUPT3HO75486 399 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MTRF1O75570 445 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 BMP10O95393 424 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ACAT1P24752 427 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 DLG4P78352 724 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NAB1Q13506 487 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 KARSQ15046 597 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NCF4Q15080 339 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TCHHL1Q5QJ38 904 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MTMR12Q9C0I1 747 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MUC13Q9H3R2 512 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MRFAP1Q9Y605 127 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 H3BMM5 538 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NVLO15381 856 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 LDOC1O95751 146 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ITGADQ13349 1161 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 VPS33AQ96AX1 596 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 EFHD2Q96C19 240 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ANKRD36BP1Q96IX9 119 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAP3K14Q99558 947 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 INO80BQ9C086 356 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GDPD2Q9HCC8 539 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 FBXO28Q9NVF7 368 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TRPC5Q9UL62 973 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RTCBQ9Y3I0 505 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MFHAS1Q9Y4C4 1052 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NR2F2P24468 414 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 AP1S2P56377 157 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC49Q8IUZ0 686 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SAMD3Q8N6K7 520 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 PPP1R36Q96LQ0 422 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CAB39Q9Y376 341 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RASA4BC9J798 803 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 VWA5AO00534 786 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RASA4O43374 803 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 IL2RBP14784 551 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NUP62P37198 522 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ADAM9Q13443 819 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM16LQ309B1 348 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 DNAJC24Q6P3W2 148 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MYCT1Q8N699 235 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GTF3C2Q8WUA4 911 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 PLEKHA4Q9H4M7 779 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CXorf56Q9H5V9 222 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 DOCK10Q96BY6 2186 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SHANK1Q9Y566 2161 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GLI2P10070 1586 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RNF103-CHMP3A0A140T963 221 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 HAUS5O94927 633 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 S100A9P06702 114 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 HSPD1P10809 573 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ABCB4P21439 1286 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GUF1Q8N442 669 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 C1orf131Q8NDD1 294 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAP4K1Q92918 833 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 C17orf75Q9HAS0 396 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 WDR47O94967 919 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MXI1P50539 228 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 YWHAGP61981 247 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 OLR1P78380 273 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CCNA1P78396 465 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 C1orf50Q9BV19 199 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GPHNQ9NQX3 736 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 NCAM2O15394 837 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TNFAIP8O95379 198 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 PDE6AP16499 860 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SFNP31947 248 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MYL7Q01449 175 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 APOA5Q6Q788 366 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CDKL3Q8IVW4 592 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TPH2Q8IWU9 490 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 FANCBQ8NB91 859 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 S100ZQ8WXG8 99 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RNF34Q969K3 372 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TOPORSQ9NS56 1045 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 KCND1Q9NSA2 647 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 WARS2Q9UGM6 360 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 PRPSAP2O60256 369 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 TNNI1P19237 187 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAPK4P31152 587 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RFC4P35249 363 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CORO7P57737 925 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 PLD3Q8IV08 490 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GJD3Q8N144 294 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SERPINB12Q96P63 405 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SRPK1Q96SB4 655 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SLF1Q9BQI6 1058 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 BFARQ9NZS9 450 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MTMR6Q9Y217 621 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms