RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PJA2O43164 708 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 FKBP1AP62942 108 aaKnown RBP12.9□□□□□ -0.34
SMPD4-213ENST00000454468 PRKCEQ02156 737 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 EMBQ6PCB8 327 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 KIFAP3Q92845 792 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 PBKQ96KB5 322 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 NUP85Q9BW27 656 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 JPH1Q9HDC5 661 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-213ENST00000454468 PXMP2Q9NR77 195 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 ADRB2P07550 413 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 EPM2AIP1Q7L775 607 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 DYDC1Q8WWB3 177 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 LPAR1Q92633 364 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 ZBTB45Q96K62 511 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 NR2E1Q9Y466 385 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 IVLP07476 585 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 PSAPP07602 524 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 KRT76Q01546 638 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 DR1Q01658 176 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 NLRP4Q96MN2 994 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 SLC9A2Q9UBY0 812 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 TBX20Q9UMR3 447 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 BACE1P56817 501 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 ERVK-9P63128 1117 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 HP1BP3Q5SSJ5 553 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 C10orf76Q5T2E6 689 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 KRT39Q6A163 491 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 KRT35Q92764 455 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 IWS1Q96ST2 819 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
SMPD4-213ENST00000454468 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
SMPD4-213ENST00000454468 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 COMTP21964 271 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 MAPK4P31152 587 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 GPC5P78333 572 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 MTM1Q13496 603 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 HAUS1Q96CS2 278 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 LAMB1P07942 1786 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 CLGNO14967 610 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 ATF7P17544 494 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 LIG3P49916 1009 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 JAK3P52333 1124 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 ZNF526Q8TF50 670 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 CRYGNQ8WXF5 182 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 CLEC4DQ8WXI8 215 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 LRRC45Q96CN5 670 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 PSMD1Q99460 953 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-213ENST00000454468 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 CSADQ9Y600 493 aa12.88□□□□□ -0.35
SMPD4-213ENST00000454468 PGK2P07205 417 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 CTNNA2P26232 953 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 IFNAR2P48551 515 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 SEC24CP53992 1094 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 ACTR2P61160 394 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 ANO5Q75V66 913 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-213ENST00000454468 PAIP2Q9BPZ3 127 aaKnown RBP12.87□□□□□ -0.35
SMPD4-213ENST00000454468 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
SMPD4-213ENST00000454468 ZNF536O15090 1300 aa12.87□□□□□ -0.35
SMPD4-213ENST00000454468 MYH4Q9Y623 1939 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms