RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 ZPBP2Q6X784 338 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 REM2Q8IYK8 340 aaPredicted RBP23.22■■□□□ 1.31
CTU2-202ENST00000453996 CAPNS2Q96L46 248 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 CCDC42Q96M95 316 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 NLRP4Q96MN2 994 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 MRPL4Q9BYD3 311 aaKnown RBP23.22■■□□□ 1.31
CTU2-202ENST00000453996 ARHGAP20Q9P2F6 1191 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 AGO2Q9UKV8 859 aaKnown RBP23.22■■□□□ 1.31
CTU2-202ENST00000453996 MYO6Q9UM54 1294 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 USP20Q9Y2K6 914 aa23.22■■□□□ 1.31
CTU2-202ENST00000453996 R3HCC1Q9Y3T6 440 aaKnown RBP23.22■■□□□ 1.31
CTU2-202ENST00000453996 ZNF233A6NK53 670 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 MSCO60682 206 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 EDN1P05305 212 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 MAPK6Q16659 721 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 DEFB115Q30KQ5 88 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 LINC01465Q8N7H1 131 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 PARD3BQ8TEW8 1205 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 SPAG5Q96R06 1193 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 ANKFY1Q9P2R3 1169 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 DAAM1Q9Y4D1 1078 aa23.21■■□□□ 1.31
CTU2-202ENST00000453996 PMM2O15305 246 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 IPO7O95373 1038 aaKnown RBP23.2■■□□□ 1.3
CTU2-202ENST00000453996 PRKCBP05771 671 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 MATR3P43243 847 aaKnown RBP eCLIP23.2■■□□□ 1.3
CTU2-202ENST00000453996 GCLMP48507 274 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 MXI1P50539 228 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 GRIK4Q16099 956 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 MTHFD1LQ6UB35 978 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 CCDC127Q96BQ5 260 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
CTU2-202ENST00000453996 MSTO1Q9BUK6 570 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 AIPL1Q9NZN9 384 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 Q9Y3F1 56 aa23.2■■□□□ 1.3
CTU2-202ENST00000453996 A0A0B4J269 797 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 LRRIQ3A6PVS8 624 aaPredicted RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 EIF3CLB5ME19 914 aaKnown RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 SERPING1P05155 500 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 GJB1P08034 283 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 PLEKP08567 350 aaPredicted RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 TMOD1P28289 359 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 CPT1AP50416 773 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 KRT83P78385 493 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 SLC9C1Q4G0N8 1177 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 ZNF592Q92610 1267 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 EIF3CQ99613 913 aaKnown RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 AP5M1Q9H0R1 490 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 LDHAP00338 332 aaKnown RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 F2P00734 622 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 EIF4A3P38919 411 aaKnown RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 ASIC2Q16515 512 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 HGSNATQ68CP4 663 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 IQCEQ6IPM2 695 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 EHBP1Q8NDI1 1231 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 ZBTB45Q96K62 511 aaPredicted RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 NFKBIZQ9BYH8 718 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 TMEM117Q9H0C3 514 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 DEF6Q9H4E7 631 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 LZTFL1Q9NQ48 299 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 CREBZFQ9NS37 354 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 REXO2Q9Y3B8 237 aaKnown RBP23.19■■□□□ 1.3
CTU2-202ENST00000453996 CASP8AP2Q9UKL3 1982 aa23.19■■□□□ 1.3
CTU2-202ENST00000453996 SSU72P8A0A1W2PR75 194 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 GTF2H1P32780 548 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 PHKA2P46019 1235 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 PTENP60484 403 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 ETF1P62495 437 aaKnown RBP23.18■■□□□ 1.3
CTU2-202ENST00000453996 POU5F1BQ06416 359 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
CTU2-202ENST00000453996 EPC2Q52LR7 807 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 TDRD12Q587J7 1177 aaKnown RBP23.18■■□□□ 1.3
CTU2-202ENST00000453996 TMEM8AQ9HCN3 771 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 APEX2Q9UBZ4 518 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 AKT3Q9Y243 479 aa23.18■■□□□ 1.3
CTU2-202ENST00000453996 RRN3P2A6NIE6 340 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 CLDN3O15551 220 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 TOM1L1O75674 476 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 AKR1A1P14550 325 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 RFX1P22670 979 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 KIF11P52732 1056 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 JAM2P57087 298 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 NLRP11P59045 1033 aaKnown RBP23.17■■□□□ 1.3
CTU2-202ENST00000453996 ARHGAP29Q52LW3 1261 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 GJB7Q6PEY0 223 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 GPIHBP1Q8IV16 184 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 KIF18AQ8NI77 898 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 LMO3Q8TAP4 145 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 ACO2Q99798 780 aaKnown RBP23.17■■□□□ 1.3
CTU2-202ENST00000453996 AJAP1Q9UKB5 411 aaPredicted RBP23.17■■□□□ 1.3
CTU2-202ENST00000453996 GABRQQ9UN88 632 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 PAXBP1Q9Y5B6 917 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 INO80B-WBP1J3KQ70 363 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 PSMD6Q15008 389 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 MARCH8Q5T0T0 291 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 MFSD14CQ5VZR4 134 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 KRT39Q6A163 491 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 SYT10Q6XYQ8 523 aa23.17■■□□□ 1.3
CTU2-202ENST00000453996 ZNF668Q96K58 619 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms