RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
NUP85-202ENST00000449421 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
NUP85-202ENST00000449421 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
NUP85-202ENST00000449421 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
NUP85-202ENST00000449421 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 SORBS3O60504 671 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 TACC1O75410 805 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
NUP85-202ENST00000449421 GH1P01241 217 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 PIGRP01833 764 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 PRKCIP41743 596 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 LIG4P49917 911 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 TFDP1Q14186 410 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 GPD1LQ8N335 351 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 RNF10Q8N5U6 811 aaKnown RBP13.66□□□□□ -0.22
NUP85-202ENST00000449421 POMGNT1Q8WZA1 660 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 FBXL18Q96ME1 805 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 PCYT2Q99447 389 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
NUP85-202ENST00000449421 CBWD1Q9BRT8 395 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 C2orf40Q9H1Z8 148 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 GUCA1BQ9UMX6 200 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
NUP85-202ENST00000449421 REXO2Q9Y3B8 237 aaKnown RBP13.66□□□□□ -0.22
NUP85-202ENST00000449421 ATP8B3O60423 1300 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 MCM3APO60318 1980 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 MYH11P35749 1972 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 ZNF233A6NK53 670 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 HNRNPDLO14979 420 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 PJA2O43164 708 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 SLC18A3Q16572 532 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 ZNF484Q5JVG2 852 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 ZBTB8OSQ8IWT0 167 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 FBXO16Q8IX29 292 aaPredicted RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 TRIM58Q8NG06 486 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 BSNDQ8WZ55 320 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 ALS2CR12Q96Q35 445 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 WDR24Q96S15 920 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.22
NUP85-202ENST00000449421 ERAP1Q9NZ08 941 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 APEX2Q9UBZ4 518 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 PTPN22Q9Y2R2 807 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 STYXL1Q9Y6J8 313 aa13.65□□□□□ -0.22
NUP85-202ENST00000449421 ANO9A1A5B4 782 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 LRRIQ4A6NIV6 560 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 MAGEB2O15479 319 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 EXTL3O43909 919 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 ADCY3O60266 1144 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 ARIH2O95376 493 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 GLRA2P23416 452 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 JAM2P57087 298 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 CCL14Q16627 93 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
NUP85-202ENST00000449421 KRT39Q6A163 491 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 DPY19L2P1Q6NXN4 242 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 ZPBP2Q6X784 338 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 PSPC1Q8WXF1 523 aaKnown RBP13.64□□□□□ -0.23
NUP85-202ENST00000449421 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.64□□□□□ -0.23
NUP85-202ENST00000449421 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 TMEM8AQ9HCN3 771 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 SIX2Q9NPC8 291 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.64□□□□□ -0.23
NUP85-202ENST00000449421 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 DNAJC12Q9UKB3 198 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 FHOD1Q9Y613 1164 aa13.64□□□□□ -0.23
NUP85-202ENST00000449421 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP85-202ENST00000449421 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 ACTN1P12814 892 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 SOX5P35711 763 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 MXI1P50539 228 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
NUP85-202ENST00000449421 PLCB4Q15147 1175 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 WHAMMP3Q1A5X7 153 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
NUP85-202ENST00000449421 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms